BLASTX nr result

ID: Atractylodes22_contig00019061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019061
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...   186   6e-45
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...   185   2e-44
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]   175   1e-41
emb|CBI25438.3| unnamed protein product [Vitis vinifera]              174   4e-41

>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
            predicted protein [Populus trichocarpa]
          Length = 606

 Score =  194 bits (494), Expect = 2e-47
 Identities = 118/246 (47%), Positives = 148/246 (60%), Gaps = 14/246 (5%)
 Frame = +2

Query: 2    PSSSSPPDRNNYHGQTRFPYEIHHSGVGSGSSA----KIRLNINNHKMPLEIPMEELGAN 169
            PS SSPPDR NY     + ++  HSGVGS S      K+R N+ N +  ++I MEEL AN
Sbjct: 360  PSKSSPPDRVNYEEPAGYTFDDVHSGVGSQSLGTSIEKMRTNVVNDEQSMDILMEELKAN 419

Query: 170  LMNNGGAEVDLRF-TPSNSGDEVRSIPTSESRSRIMSHGSDVNSGRSNKKILFXXXXXXX 346
            L NNG    +    TP NSGD V SIP+S S   I  H  +VN GRS+KK          
Sbjct: 420  LRNNGVRMTEANMATPRNSGDGVGSIPSSGSGHGIPPHYLEVNLGRSSKKGRHSSSRHSG 479

Query: 347  XXLEAVAEELSWNHAGLDFELDRVSET----ERDLAPENDLP-----VPDQPVETLTDSI 499
              LE V EE  W  A  +FEL R+SE     +++L  E +       V  QPV+ + DSI
Sbjct: 480  SSLETVVEEDPWRFADPNFELSRLSENGPTPDQELLVETEPTQTQHHVVGQPVDKIADSI 539

Query: 500  CKHLKMYFDMPGSAETESLNQLASGLNRKKAAGLFYQTCVLASRDFIRVEQKAPYGNILI 679
               +K +F+ PG+ + ESLN LA+G+N K AA LFYQTCVLASRDF+RVEQK PYG+ILI
Sbjct: 540  RMQMKTHFETPGAPQVESLNNLAAGMNTKAAALLFYQTCVLASRDFLRVEQKVPYGDILI 599

Query: 680  SRGTKM 697
            S+G KM
Sbjct: 600  SKGAKM 605


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
            vinifera]
          Length = 608

 Score =  186 bits (473), Expect = 6e-45
 Identities = 114/244 (46%), Positives = 146/244 (59%), Gaps = 12/244 (4%)
 Frame = +2

Query: 2    PSSSSPPDRNNYHGQTRFPYEIHHSGVGSGS-----SAKIRLNINNHKMPLEIPMEELGA 166
            PSSSSP  R ++ G   FP+E   SGVGS S       +   N +N++   EI M  L  
Sbjct: 365  PSSSSPSHRVHHQGPAGFPFEDFLSGVGSPSLGVSIEKQRGTNHDNNESQFEILMTSLRT 424

Query: 167  NLMNNGGAEVDLRFTPSNSG----DEVRSIPTSESRSRIMSHGSDVNSGRSNKKILFXXX 334
             LMN+     +  FTP NSG    +EVRS P S S     SH S+VNSGR NKK  +   
Sbjct: 425  KLMNDNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNSGRINKKRPYSWS 484

Query: 335  XXXXXXLEAVAEELSWNHAGLDFELDRVSETER--DLAP-ENDLPVPDQPVETLTDSICK 505
                  LE V EE  +NH   +F+L ++SE E   +  P +   P+   P+E +TDSI  
Sbjct: 485  RHSGSSLEPVDEEHPFNHTDPNFKLSKLSEHELLVETGPTQTQNPIIPPPIEKITDSIRM 544

Query: 506  HLKMYFDMPGSAETESLNQLASGLNRKKAAGLFYQTCVLASRDFIRVEQKAPYGNILISR 685
            HLK +FD PG+ + ESL+QLASG++R +AA LFYQTCVLA+R FI+VEQ  PYG+ILISR
Sbjct: 545  HLKTHFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEPYGDILISR 604

Query: 686  GTKM 697
            G KM
Sbjct: 605  GAKM 608


>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
            gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
            putative [Ricinus communis]
          Length = 613

 Score =  185 bits (469), Expect = 2e-44
 Identities = 114/250 (45%), Positives = 150/250 (60%), Gaps = 18/250 (7%)
 Frame = +2

Query: 2    PSSSSPPDRNNYHGQTRFPYEIHHSGVGS---GSSAKIRLNINNHKMPLEIPMEELGANL 172
            PSSSSP +R +Y   T +P+E   SG+GS   G+  K R  I N  MP+E  M EL + L
Sbjct: 370  PSSSSPLERGDYQDPTGYPFEDFQSGIGSESLGAIEKQRKTIINEVMPMETLMNELRSKL 429

Query: 173  MNNGG----AEVDLRFTPSNSGDEVRSIPTSESRSRIMSHGSDVNSGRSNKKILFXXXXX 340
            +NNG     A +D+ F    +GDEVRSIP+S S   + SH S+V+S R      +     
Sbjct: 430  VNNGSKTTEANLDITFCKF-TGDEVRSIPSSGSGHGMPSHQSEVHSARKRP---YSGSRH 485

Query: 341  XXXXLEAVAEELSWNHAGLDFELDRVSETERDLAPENDL-----------PVPDQPVETL 487
                LE V EE SW     +F+L R+SE  +DL P+ +L           P+ + PV+ +
Sbjct: 486  SGSSLEPVEEENSWQFPDPNFKLARLSE--KDLTPDQELLVETGPTQTQKPIINPPVDKM 543

Query: 488  TDSICKHLKMYFDMPGSAETESLNQLASGLNRKKAAGLFYQTCVLASRDFIRVEQKAPYG 667
            TD+I   +K +F+ PG+   ESLN LA+G+NRK AA LFYQTCVLASRD +RVEQK PYG
Sbjct: 544  TDTIRMQMKTHFETPGAPAVESLNNLAAGMNRKGAAMLFYQTCVLASRDCLRVEQKVPYG 603

Query: 668  NILISRGTKM 697
             ILISRG K+
Sbjct: 604  EILISRGEKL 613


>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score =  175 bits (444), Expect = 1e-41
 Identities = 112/252 (44%), Positives = 145/252 (57%), Gaps = 20/252 (7%)
 Frame = +2

Query: 2    PSSSSPPDRNNYHGQTRFPYEIHHSGVGSGS-----SAKIRLNINNHKMPLEIPMEELGA 166
            PSSSSP  R ++ G   FP+E   SGVGS S       +   N +N++   EI M  L  
Sbjct: 359  PSSSSPSHRVHHQGPAGFPFEDFLSGVGSPSLGVSIEKQRGTNHDNNESQFEILMTSLRT 418

Query: 167  NLMNNGGAEVDLRFTPSNSG----DEVRSIPTSESRSRIMSHGSDVNSGRSNKKILFXXX 334
             LMN+     +  FTP NSG    +EVRS P S S     SH S+VNSGR +        
Sbjct: 419  KLMNDNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNSGRHSGS------ 472

Query: 335  XXXXXXLEAVAEELSWNHAGLDFELDRVSETERDLAPENDL-----------PVPDQPVE 481
                  LE V EE  +NH   +F+L ++SE    + PE++L           P+   P+E
Sbjct: 473  -----SLEPVDEEHPFNHTDPNFKLSKLSEDF--MMPEHELLVETGPTQTQNPIIPPPIE 525

Query: 482  TLTDSICKHLKMYFDMPGSAETESLNQLASGLNRKKAAGLFYQTCVLASRDFIRVEQKAP 661
             +TDSI  HLK +FD PG+ + ESL+QLASG++R +AA LFYQTCVLA+R FI+VEQ  P
Sbjct: 526  KITDSIRMHLKTHFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEP 585

Query: 662  YGNILISRGTKM 697
            YG+ILISRG KM
Sbjct: 586  YGDILISRGAKM 597


>emb|CBI25438.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  174 bits (440), Expect = 4e-41
 Identities = 110/240 (45%), Positives = 142/240 (59%), Gaps = 8/240 (3%)
 Frame = +2

Query: 2    PSSSSPPDRNNYHGQTRFPYEIHHSGVGSGSSAKIR-LNINNHKMPLEIPMEELGANLMN 178
            PSSSSP  R ++ G   F   + +S     S  K R  N +N++   EI M  L   LMN
Sbjct: 378  PSSSSPSHRVHHQGPAGF---VSYSAKPFISIEKQRGTNHDNNESQFEILMTSLRTKLMN 434

Query: 179  NGGAEVDLRFTPSNSG----DEVRSIPTSESRSRIMSHGSDVNSGRSNKKILFXXXXXXX 346
            +     +  FTP NSG    +EVRS P S S     SH S+VNSGR NKK  +       
Sbjct: 435  DNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNSGRINKKRPYSWSRHSG 494

Query: 347  XXLEAVAEELSWNHAGLDFELDRVSETER--DLAP-ENDLPVPDQPVETLTDSICKHLKM 517
              LE V EE  +NH   +F+L ++SE E   +  P +   P+   P+E +TDSI  HLK 
Sbjct: 495  SSLEPVDEEHPFNHTDPNFKLSKLSEHELLVETGPTQTQNPIIPPPIEKITDSIRMHLKT 554

Query: 518  YFDMPGSAETESLNQLASGLNRKKAAGLFYQTCVLASRDFIRVEQKAPYGNILISRGTKM 697
            +FD PG+ + ESL+QLASG++R +AA LFYQTCVLA+R FI+VEQ  PYG+ILISRG KM
Sbjct: 555  HFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEPYGDILISRGAKM 614


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