BLASTX nr result

ID: Atractylodes22_contig00018986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018986
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch syntha...    84   7e-14
ref|XP_002531856.1| starch synthase, putative [Ricinus communis]...    73   9e-11
ref|XP_002278470.1| PREDICTED: granule-bound starch synthase 2, ...    70   8e-10
ref|XP_002882195.1| hypothetical protein ARALYDRAFT_477411 [Arab...    69   2e-09
ref|XP_002324061.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09

>sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2,
           chloroplastic/amyloplastic; AltName: Full=Granule-bound
           starch synthase II; Short=GBSS-II; Short=SS II; Flags:
           Precursor gi|48927500|emb|CAA61241.2| soluble starch
           synthase II precursor [Solanum tuberosum]
          Length = 767

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 45/97 (46%), Positives = 66/97 (68%)
 Frame = -1

Query: 599 NHRRPKFPLVAYYPPRKSLLDMTFVCNNNNAAGGGRVWRIKATGENSSGGDASGDTDEAL 420
           N   P  PL+A  P + SL+      + ++     R+ R+KATGENS    ++ ++++AL
Sbjct: 11  NQFHPNLPLLALRPKKLSLI------HGSSREQMWRIKRVKATGENSGEAASADESNDAL 64

Query: 419 QVVIEKSKKILAKQRDLLQQIAERREIITSIKSTTIN 309
           QV IEKSKK+LA Q+DLLQQIAERR++++SIKS+  N
Sbjct: 65  QVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLAN 101


>ref|XP_002531856.1| starch synthase, putative [Ricinus communis]
           gi|223528506|gb|EEF30534.1| starch synthase, putative
           [Ricinus communis]
          Length = 754

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
 Frame = -1

Query: 653 MATTGSLAFVID---HTALL----NNHRRPKFPLVAYYPPRKSLLDMTFVCNNNNAAGGG 495
           MA+ GSL F+++    +++L    +  R  KFP  AY P     +  +F  +N+      
Sbjct: 1   MASLGSLPFIVEPKTESSILFHGKSQQRSSKFPSFAYRPN----ISYSFAISNDGFPL-- 54

Query: 494 RVWRIKATGENSSGGDASGDTDEALQVVIEKSKKILAKQRDLLQQIAERREIITSIKSTT 315
           R+  ++ATG++    D S D   A+Q  IEKSKK+LA Q+DLLQQIAERR++++ IKS+ 
Sbjct: 55  RLKSVRATGKDGVNSDGSED---AIQTTIEKSKKVLAMQKDLLQQIAERRKLVSDIKSSI 111

Query: 314 IN 309
           I+
Sbjct: 112 ID 113


>ref|XP_002278470.1| PREDICTED: granule-bound starch synthase 2,
           chloroplastic/amyloplastic-like [Vitis vinifera]
          Length = 772

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
 Frame = -1

Query: 653 MATTGSLAFVIDHTALL--NNHRRPKFPLVAYY----PPRKSLLDMTF-----------V 525
           MA+ G ++FV +  A +     RRP+F    Y     P      D  F           +
Sbjct: 1   MASVGCVSFVTERAASIWSGRDRRPRFSFPVYRLRMSPGCAISKDSIFGYSREDCVRFSL 60

Query: 524 CNNNNAAGGGRVWRIKATGENSSGGDASGDTDEALQVVIEKSKKILAKQRDLLQQIAERR 345
           C+     G   V   +A GE S  G+     ++A    IEKSKK+LA QRDLLQQIAERR
Sbjct: 61  CSRRQVLGSRGV---RARGEGSVEGEDGDRLEDAFDATIEKSKKVLAMQRDLLQQIAERR 117

Query: 344 EIITSIKSTTIN 309
           ++++SIKS+ IN
Sbjct: 118 KLVSSIKSSIIN 129


>ref|XP_002882195.1| hypothetical protein ARALYDRAFT_477411 [Arabidopsis lyrata subsp.
           lyrata] gi|297328035|gb|EFH58454.1| hypothetical protein
           ARALYDRAFT_477411 [Arabidopsis lyrata subsp. lyrata]
          Length = 796

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = -1

Query: 491 VWRIKATGENSSGGDASGDTDE-ALQVVIEKSKKILAKQRDLLQQIAERREIITSIKSTT 315
           V R++ATG +SS   + GD  E ALQ  IEKSKK+LA QR+LLQQIAERR++++SIK +T
Sbjct: 61  VRRVEATGSDSSESASGGDEPEDALQATIEKSKKVLAMQRNLLQQIAERRKLVSSIKEST 120

Query: 314 IN 309
            N
Sbjct: 121 PN 122


>ref|XP_002324061.1| predicted protein [Populus trichocarpa] gi|222867063|gb|EEF04194.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
 Frame = -1

Query: 653 MATTGSLAFVIDHT-----ALLN--NHRRPKFPLVAYYPPRKSLLDMTFVCNNNNAAGGG 495
           M++ GSL F+I+ T      LL+  N  R KF        +   L +       N     
Sbjct: 1   MSSIGSLPFIIETTKAESPVLLSRKNKNRDKFSFFTCRTKKSHNLAVL------NYGFSP 54

Query: 494 RVWRIKATGENSSGGDASGDTDEALQVVIEKSKKILAKQRDLLQQIAERREIITSIKSTT 315
           +   ++AT E  + GD S D   ALQ  IEKSKK+LA QRDLLQQIAERR+I++SIKS+ 
Sbjct: 55  KSKPVRATVEEGASGDESED---ALQASIEKSKKVLAMQRDLLQQIAERRKIVSSIKSSI 111

Query: 314 IN 309
           I+
Sbjct: 112 ID 113


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