BLASTX nr result

ID: Atractylodes22_contig00018927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018927
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    48   9e-09
emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulg...    42   3e-08
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    47   9e-08
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...    45   3e-06

>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 47.8 bits (112), Expect(2) = 9e-09
 Identities = 22/45 (48%), Positives = 29/45 (64%)
 Frame = -1

Query: 258 RPQFRNGKLKRLLPGSAELLETPFTEAEIWEAVKSCDNAKSPGPD 124
           RP+F N + K+L+P    +L  PF+  EI  AV SCD  K+PGPD
Sbjct: 405 RPKFENLEFKKLIPSQTNMLCEPFSLDEIDAAVASCDGNKAPGPD 449



 Score = 36.6 bits (83), Expect(2) = 9e-09
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 94  WQVIKGDILKMMEFFWIGAKINKGCNSSFIS 2
           W+VIK D+  M+  FW    + KGCN++FI+
Sbjct: 460 WEVIKQDVYDMVRRFWNTGYLPKGCNTAFIA 490


>emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulgaris]
          Length = 507

 Score = 41.6 bits (96), Expect(2) = 3e-08
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = -1

Query: 258 RPQFRNGKLKRLLPGSAELLETPFTEAEIWEAVKSCDNAKSPGPD 124
           RP F      +L       L  PFT  EI EAV SCD  K+PGPD
Sbjct: 275 RPVFNGLNFNKLSESECSSLIAPFTHEEIDEAVDSCDAQKAPGPD 319



 Score = 40.8 bits (94), Expect(2) = 3e-08
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -3

Query: 94  WQVIKGDILKMMEFFWIGAKINKGCNSSFIS 2
           W+VIK DI K++E FW    +  GCNS+FI+
Sbjct: 330 WEVIKKDIYKIVEDFWASGSLPHGCNSAFIA 360


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 47.0 bits (110), Expect(2) = 9e-08
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = -1

Query: 258 RPQFRNGKLKRLLPGSAELLETPFTEAEIWEAVKSCDNAKSPGPD 124
           RP F +   K+L     E+L + FT +EI EAV SCD +KSPGPD
Sbjct: 405 RPVFGDLNFKQLNDSHREILTSQFTRSEIDEAVSSCDGSKSPGPD 449



 Score = 33.9 bits (76), Expect(2) = 9e-08
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -3

Query: 94  WQVIKGDILKMMEFFWIGAKINKGCNSSFIS 2
           W+VIK D+  ++  FW  +++ +GCN++ I+
Sbjct: 460 WEVIKEDVYGIVNEFWHSSRLPRGCNTALIA 490


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 24/45 (53%), Positives = 26/45 (57%)
 Frame = -1

Query: 258 RPQFRNGKLKRLLPGSAELLETPFTEAEIWEAVKSCDNAKSPGPD 124
           RP   N  LKRL    A  L TPFT  EI  AV SC + K+PGPD
Sbjct: 406 RPTLENLHLKRLSQNQANSLITPFTTEEIDTAVSSCASDKAPGPD 450



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 94  WQVIKGDILKMMEFFWIGAKINKGCNSSFIS 2
           W +IK DI  ++  FW    + +GCN+++I+
Sbjct: 461 WDIIKTDIYGIVNDFWETGCLPQGCNTAYIA 491


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