BLASTX nr result

ID: Atractylodes22_contig00018853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018853
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp....    81   1e-13
ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsi...    80   1e-13
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002529638.1| cell cycle checkpoint protein rad17, putativ...    76   2e-12
ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD...    75   7e-12

>ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312607|gb|EFH43031.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/83 (44%), Positives = 54/83 (65%)
 Frame = +1

Query: 1   CKLRWHAIRRPQLWQVEQSLWRNKKEMVGQRCVAYNGVNLSELSIIATEWKPVLKWLGSR 180
           C  RWH IR+P+LWQVEQS  + KK +  QR ++Y G  ++++S++ATE+ PVLKWL  R
Sbjct: 500 CSSRWHVIRKPKLWQVEQSSMQTKKNLREQRNISYEGSRVADISVMATEYSPVLKWLSYR 559

Query: 181 AHQGSIGGDMVDNEEGYSDWSLD 249
           A   +  G   + +E  S+ S D
Sbjct: 560 ASPDAFAGMGEETDEEESEISED 582


>ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsis thaliana]
           gi|55976607|sp|Q9MBA3.1|RAD17_ARATH RecName: Full=Cell
           cycle checkpoint protein RAD17; Short=AtRAD17; AltName:
           Full=Radiation-sensitive protein 17
           gi|6855472|dbj|BAA90479.1| AtRAD17 [Arabidopsis
           thaliana] gi|10177128|dbj|BAB10418.1| AtRAD17
           [Arabidopsis thaliana] gi|332010780|gb|AED98163.1| cell
           cycle checkpoint protein RAD17 [Arabidopsis thaliana]
          Length = 599

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +1

Query: 1   CKLRWHAIRRPQLWQVEQSLWRNKKEMVGQRCVAYNGVNLSELSIIATEWKPVLKWLGSR 180
           C  RWH IR+P+LWQVEQS  + KK +  QR ++Y G  ++++S++ATE+ PVLKWL  R
Sbjct: 511 CSSRWHVIRKPKLWQVEQSSIQTKKNLREQRNISYEGSRVADISVMATEYSPVLKWLSYR 570

Query: 181 AHQGSIGGDMVDNEEGYSDWSLD 249
           A   +  G   + +E  SD S D
Sbjct: 571 ASPDAFPGMGEETDEEDSDISED 593


>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = +1

Query: 10  RWHAIRRPQLWQVEQSLWRNKKEMVGQRCVAYNGVNLSELSIIATEWKPVLKWLGSRA 183
           RWHAIR+P+LWQVE+S+  N+KE+V QR +AYNG +   +S +ATE+ P+LKWL  RA
Sbjct: 516 RWHAIRKPKLWQVEKSMLHNQKEIVRQRFIAYNGSSSCNVSDVATEYMPLLKWLEHRA 573


>ref|XP_002529638.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
           gi|223530864|gb|EEF32725.1| cell cycle checkpoint
           protein rad17, putative [Ricinus communis]
          Length = 439

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/78 (48%), Positives = 48/78 (61%)
 Frame = +1

Query: 10  RWHAIRRPQLWQVEQSLWRNKKEMVGQRCVAYNGVNLSELSIIATEWKPVLKWLGSRAHQ 189
           RWHAIRRP+LWQ  QS+ RN+K M+ QR +A  G + S ++ I TE+ PVLKWLG RA  
Sbjct: 343 RWHAIRRPKLWQAGQSMLRNQKAMLSQRLIANGGSSFSNVAEIVTEYVPVLKWLGHRAPG 402

Query: 190 GSIGGDMVDNEEGYSDWS 243
                    + E Y D S
Sbjct: 403 VEAHQVFEHHNEAYDDSS 420


>ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cucumis
           sativus] gi|449491306|ref|XP_004158856.1| PREDICTED:
           cell cycle checkpoint protein RAD17-like [Cucumis
           sativus]
          Length = 605

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 18/95 (18%)
 Frame = +1

Query: 10  RWHAIRRPQLWQVEQSLWRNKKEMVGQRCVAYNGVNLSELSIIATEWKPVLKWLGSRAHQ 189
           RWHAIRRP+LWQ+E S   NKK MV QR V Y G++L+  S++ATE+ P LKWLG+   +
Sbjct: 512 RWHAIRRPKLWQIEGSSLSNKK-MVKQRFVPYGGISLAHFSVVATEYVPALKWLGNSVSE 570

Query: 190 G----------SIGGDMV--------DNEEGYSDW 240
                      + G DMV         +EE   DW
Sbjct: 571 DHEKLWALTEENTGFDMVISGDQESHTSEEEIEDW 605


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