BLASTX nr result

ID: Atractylodes22_contig00018803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018803
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group] g...   184   2e-44
gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subc...   178   9e-43
gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...   173   4e-41
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...   173   4e-41
ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226...   160   3e-37

>ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
           gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa
           Japonica Group]
          Length = 280

 Score =  184 bits (467), Expect = 2e-44
 Identities = 101/224 (45%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
 Frame = +3

Query: 3   STSVREQGNVLLQCPKLTETNYTMWALLMETILKANGLWETID--VKDTVDEKKVYTSKA 176
           S S+RE G V L  P LT TNY+ WA+ ME  ++A G+W+ I+    D V++KK   + A
Sbjct: 18  SRSMRE-GGVSLPYPMLTSTNYSTWAIKMEANMEAQGIWDAIESAADDVVEKKKDKMALA 76

Query: 177 MIFQTLPENVLMQVAQCSTTKEVWDSIKVRFIGVDLVQKARSQTLRXXXXXXXXXXXXTV 356
            +F  +P+ VL Q+A   T KE W+S+K RF+GVD V+KAR QTL+            T+
Sbjct: 77  CLFGAVPDEVLQQIANKKTAKEAWESLKTRFLGVDRVKKARVQTLKSEFKALCMKKTETI 136

Query: 357 SSFASKLSNIRAIFGNLGTTLESKIIVRKLLNSVPKKFLPIVATIEQYQDLDKMSFEEAV 536
             FA K+S +      LG T+    +V+KLL+SVP+KFL I+A IEQ+ DLD M FEEA+
Sbjct: 137 DEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAI 196

Query: 537 GRLTAFEERIKSQDTPEANDQDKLLMASSN-NQSRGRGRGKNFN 665
           GRL AFEERI+       ND ++LL+ + N +   GR RGK F+
Sbjct: 197 GRLKAFEERIRKHSD---NDGEQLLLTTRNTDDGAGRARGKRFD 237


>gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 271

 Score =  178 bits (452), Expect = 9e-43
 Identities = 99/224 (44%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
 Frame = +3

Query: 3   STSVREQGNVLLQCPKLTETNYTMWALLMETILKANGLWETID--VKDTVDEKKVYTSKA 176
           S S+RE G V L  P LT TNY+ WA+ ME  ++A G+W+ I+    D V++KK   + A
Sbjct: 9   SRSMRE-GGVSLPYPMLTSTNYSTWAIKMEANMEAQGIWDAIESAADDVVEKKKDKMALA 67

Query: 177 MIFQTLPENVLMQVAQCSTTKEVWDSIKVRFIGVDLVQKARSQTLRXXXXXXXXXXXXTV 356
            +F  +P+ VL Q+A   T KE W+S+K RF+GVD V+KAR QTL+            T+
Sbjct: 68  CLFGAVPDEVLQQIANKKTAKEAWESLKTRFLGVDRVKKARVQTLKSEFKALCMKKTETI 127

Query: 357 SSFASKLSNIRAIFGNLGTTLESKIIVRKLLNSVPKKFLPIVATIEQYQDLDKMSFEEAV 536
             FA K+S +      LG T+    +V+KLL+SVP+KFL I+A IEQ+ DLD M FEEA+
Sbjct: 128 DEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAI 187

Query: 537 GRLTAFEERIKSQDTPEANDQDKLLMASSN-NQSRGRGRGKNFN 665
           GRL AFEERI+       N  ++LL+ + N +   GR R K F+
Sbjct: 188 GRLKAFEERIRKHSD---NYGEQLLLTTRNTDDGAGRARSKRFD 228


>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 904

 Score =  173 bits (438), Expect = 4e-41
 Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
 Frame = +3

Query: 3    STSVREQGNVLLQCPKLTETNYTMWALLMETILKANGLWETID--VKDTVDEKKVYTSKA 176
            S S+RE G V L  P LT TNY+ WA+ ME  ++A G+W+ I+    + VD KK   ++A
Sbjct: 431  SRSMRE-GIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARA 489

Query: 177  MIFQTLPENVLMQVAQCSTTKEVWDSIKVRFIGVDLVQKARSQTLRXXXXXXXXXXXXTV 356
             +F  +PE+VL Q+A+  T KEVW+S+K RF+GV+ V+KAR QTL+            ++
Sbjct: 490  CLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESI 549

Query: 357  SSFASKLSNIRAIFGNLGTTLESKIIVRKLLNSVPKKFLPIVATIEQYQDLDKMSFEEAV 536
              FA K+S +     +LG T++    V+KLL+SVP KFL ++A IEQ+ DLD M F+EA+
Sbjct: 550  DEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAI 609

Query: 537  GRLTAFEERIKSQDTPEANDQDKLLMASSNNQSRGRGRGK 656
            GRL A+EERI+ +D    +   + L+ +S + S GR R K
Sbjct: 610  GRLKAYEERIRKRD----DKNGEHLLFTSGDTSGGRSRVK 645


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score =  173 bits (438), Expect = 4e-41
 Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
 Frame = +3

Query: 3   STSVREQGNVLLQCPKLTETNYTMWALLMETILKANGLWETID--VKDTVDEKKVYTSKA 176
           S S+RE G V L  P LT TNY+ WA+ ME  ++A G+W+ I+    + VD KK   ++A
Sbjct: 18  SRSMRE-GIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARA 76

Query: 177 MIFQTLPENVLMQVAQCSTTKEVWDSIKVRFIGVDLVQKARSQTLRXXXXXXXXXXXXTV 356
            +F  +PE+VL Q+A+  T KEVW+S+K RF+GV+ V+KAR QTL+            ++
Sbjct: 77  CLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESI 136

Query: 357 SSFASKLSNIRAIFGNLGTTLESKIIVRKLLNSVPKKFLPIVATIEQYQDLDKMSFEEAV 536
             FA K+S +     +LG T++    V+KLL+SVP KFL ++A IEQ+ DLD M F+EA+
Sbjct: 137 DEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAI 196

Query: 537 GRLTAFEERIKSQDTPEANDQDKLLMASSNNQSRGRGRGK 656
           GRL A+EERI+ +D    +   + L+ +S + S GR R K
Sbjct: 197 GRLKAYEERIRKRD----DKNGEHLLFTSGDTSGGRSRVK 232


>ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226793 [Cucumis sativus]
          Length = 407

 Score =  160 bits (404), Expect = 3e-37
 Identities = 95/246 (38%), Positives = 132/246 (53%), Gaps = 24/246 (9%)
 Frame = +3

Query: 45  PKLTETNYTMWALLMETILKANGLWETIDVKD--TVDEKKVYTSKAMIFQTLPENVLMQV 218
           P LT  NYT+W +  E IL A G+WE I+      VD KK   ++A I Q +PE+VL+Q+
Sbjct: 6   PMLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPEDVLLQI 65

Query: 219 AQCSTTKEVWDSIKVRFIGVDLVQKARSQTLRXXXXXXXXXXXXTVSSFASKLSNIRAIF 398
           A+  T KE+WDS+K R++G + V+ AR QTL+            T+  F  K+S + + F
Sbjct: 66  AKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISGLASKF 125

Query: 399 GNLGTTLESKIIVRKLLNSVPKKFLPIVATIEQYQDLDKMSFEEAVGRLTAFEERIKSQD 578
             L   LE   +V KLL+SVP K+LPIV  I+Q+QDL+ M FEEA+GR+ A+EER     
Sbjct: 126 TTLRVALEDSSLVNKLLDSVPDKYLPIVVGIKQFQDLETMPFEEAIGRMKAYEERTTRFR 185

Query: 579 TPEANDQDKLLMA-----------SSNNQS-----------RGRGRGKNFNNEAKESMKW 692
               N   +LL+            S +N S           RGR RG     E + S   
Sbjct: 186 ENNNNTDGQLLLTHAEWKARQKGHSGDNSSMNKGRRFSGIDRGRWRGCGRGTERQNSAGG 245

Query: 693 KNSTGN 710
            ++TGN
Sbjct: 246 TSNTGN 251


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