BLASTX nr result

ID: Atractylodes22_contig00018773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018773
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    82   3e-14
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 79   3e-13
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    78   7e-13
ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    76   2e-12
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   2e-12

>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
 Frame = +2

Query: 5   EIDQWMLFLSRNSVRELVLTNSNRRYGLPSYVFSCLELRKLELATCIFKPPLEFEGFLNL 184
           +IDQW+LFLSRN ++ELVL      + +PS +F+CL+L +LEL  C F PP  F+GF +L
Sbjct: 98  DIDQWLLFLSRNGIKELVLELGEGEFRVPSCLFNCLKLTRLELCHCEFDPPQYFKGFSSL 157

Query: 185 EDLFLKMVDFRANSCGSLVT-LPQLKKLQLWYCTNVYNFNIEARTLQKLFVIDCPDALLL 361
           + L L  +        SL++  P L+ L L Y  ++   +I A  L  L++      + L
Sbjct: 158 KSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLV-LSISAPNLMYLYLDGEFKDIFL 216

Query: 362 RLLDGPCLIQVLIYFRKPVVDFAQVGRMNL 451
                   I V +Y  + V DF Q    NL
Sbjct: 217 ENTPKLVAISVSMYMHEDVTDFEQSSDYNL 246


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
 Frame = +2

Query: 5   EIDQWMLFLSRNSVRELVLTNSNRRYGLPSYVFSCLELRKLELATCIFKPPLEFEGFLNL 184
           +IDQW+LFLSRN ++ELVL      + +P+ +F+CL+L  LEL  C F PP  F+GF  L
Sbjct: 98  DIDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157

Query: 185 EDLFLKMVDFRANSCGSLVT-LPQLKKLQLWYCTNVYNFNIEARTLQKLFVIDCPDALLL 361
           + L L  +        SL++  P L+ L L Y  ++   +I A  L  L++      + L
Sbjct: 158 KSLNLHQIPVAPEVIESLISGCPLLEFLSLSYFDSLV-LSISAPNLMYLYLDGEFKDIFL 216

Query: 362 RLLDGPCLIQVLIYFRKPVVDFAQVGRMNL 451
                   I V +Y  + V DF Q    NL
Sbjct: 217 ENTPKLVAISVSMYMHEDVTDFEQSSDYNL 246


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
 Frame = +2

Query: 5   EIDQWMLFLSRNSVRELVLTNSNRRYGLPSYVFSCLELRKLELATCIFKPPLEFEGFLNL 184
           +IDQW+LFLSRN ++ELVL      + +P+ +F+CL+L  LEL  C F PP  F+GF  L
Sbjct: 98  DIDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157

Query: 185 EDLFLKMVDFRANSCGSLVT-LPQLKKLQLWYCTNVYNFNIEARTLQKLFVIDCPDALLL 361
           + L L  +        SL++  P L+ L L Y  ++   +I A  L  L++      + L
Sbjct: 158 KSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLV-LSISAPNLMYLYLDGEFKDIFL 216

Query: 362 RLLDGPCLIQVLIYFRKPVVDFAQVGRMNL 451
                   I V +Y  + V DF Q    NL
Sbjct: 217 ENTPKLVAISVSMYMHEDVTDFEQSSDYNL 246


>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 414

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
 Frame = +2

Query: 5   EIDQWMLFLSRNSVRELVLTNSNRR-YGLPSYVFSCLELRKLELATCIFKPPLEFEGFLN 181
           +IDQW+LFLSRN V+E++L       + +PS +FSC +L +LEL  C   PP  F+GFL+
Sbjct: 93  DIDQWILFLSRNDVKEILLELGECEWFTVPSCLFSCQKLTRLELVRCELHPPPTFKGFLH 152

Query: 182 LEDLFLKMVDFRANSCGSLV-TLPQLKKLQLWYCTNVYNFNIEARTLQKLFVIDCPDALL 358
           L+ L L  V     +  SLV + P L+ L L Y  ++   NI A  L+ LF+      + 
Sbjct: 153 LKILNLHQVSITCEAIQSLVSSCPLLECLSLSYFDSL-ALNISAPNLKYLFLEGEFKEIC 211

Query: 359 LRLLDGPCLIQVLIYFRKPVVD 424
           L    G   + V +Y    VV+
Sbjct: 212 LENTPGLVSVTVAMYMSDDVVE 233


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = +2

Query: 5   EIDQWMLFLSRNSVRELVLT---NSNRRYGLPSYVFSCLELRKLELATCIFKPPLEFEGF 175
           +ID+W L+L+R  V+E VL    N ++RY +PS++FSC  L  LEL  C   PP  F+GF
Sbjct: 120 DIDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSLHHLELLECWLIPPSTFQGF 179

Query: 176 LNLEDLFLKMVDFRANSCGSLV-TLPQLKKLQLWYCTNVYNFNIEARTLQ 322
            NL+ L L+ V    ++  +L+ +   L++L L  C    N NI A  LQ
Sbjct: 180 KNLKSLDLQYVTLTKDAVENLISSCLMLERLILMECDGFKNLNIHAPNLQ 229


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