BLASTX nr result

ID: Atractylodes22_contig00018648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018648
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43033.1| unknown [Lotus japonicus]                              224   1e-56
emb|CBI38108.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   223   2e-56
ref|XP_003570130.1| PREDICTED: 50S ribosomal protein L18-like [B...   223   3e-56
ref|NP_001150881.1| structural constituent of ribosome [Zea mays...   220   2e-55

>gb|AFK43033.1| unknown [Lotus japonicus]
          Length = 202

 Score =  224 bits (571), Expect = 1e-56
 Identities = 109/131 (83%), Positives = 122/131 (93%)
 Frame = -3

Query: 514 GFVVEAAWTRRSRSEAEKRPNKKSWKQRTDMYMRPFQLNVFFSKRFIHAKVMHRGTSKVI 335
           G  V AAWTRRSR EA KRPN+KSWKQRTDMYMRPF LNVFFSKRFIHAKVMHRGTSKVI
Sbjct: 72  GSFVRAAWTRRSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVI 131

Query: 334 SVATTNSKDLRNTLPSLIDNEACRVIGRLIAERSKEADVFAMAFEAKKNERIEGRLAIVL 155
           SVATTNSKDLRN+LPSL D++ACRV+GRLIA+RSKEADV+A+A+E +K+ERIEG+L IVL
Sbjct: 132 SVATTNSKDLRNSLPSLTDHDACRVVGRLIAQRSKEADVYALAYEPRKDERIEGKLGIVL 191

Query: 154 DTIKDNGIIFV 122
           DTIK+NGIIFV
Sbjct: 192 DTIKENGIIFV 202


>emb|CBI38108.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  223 bits (569), Expect = 2e-56
 Identities = 120/180 (66%), Positives = 134/180 (74%)
 Frame = -3

Query: 661 SSSFNLQPELLRYRPRKPLSLSWCXXXXXXXXXXXXXXXXXXXXXLKNKGFVVEAAWTRR 482
           SS      +L + R  KP SLSW                        NK  VV+AAWTRR
Sbjct: 20  SSPCLFSTDLFQSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSL--NKCLVVQAAWTRR 77

Query: 481 SRSEAEKRPNKKSWKQRTDMYMRPFQLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLR 302
           SRSEA KRP++KSWKQ+TDMYMRPF LNVFFSKRFIHAKVMHR TSKVISVATTNSKDLR
Sbjct: 78  SRSEAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLR 137

Query: 301 NTLPSLIDNEACRVIGRLIAERSKEADVFAMAFEAKKNERIEGRLAIVLDTIKDNGIIFV 122
           NTL SL D+ ACRVIG+LIAERS EADVFAM++E +K+ERIEG+L IVLDTIK+NGIIFV
Sbjct: 138 NTLSSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGIIFV 197


>ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
          Length = 183

 Score =  223 bits (569), Expect = 2e-56
 Identities = 120/180 (66%), Positives = 134/180 (74%)
 Frame = -3

Query: 661 SSSFNLQPELLRYRPRKPLSLSWCXXXXXXXXXXXXXXXXXXXXXLKNKGFVVEAAWTRR 482
           SS      +L + R  KP SLSW                        NK  VV+AAWTRR
Sbjct: 6   SSPCLFSTDLFQSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSL--NKCLVVQAAWTRR 63

Query: 481 SRSEAEKRPNKKSWKQRTDMYMRPFQLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLR 302
           SRSEA KRP++KSWKQ+TDMYMRPF LNVFFSKRFIHAKVMHR TSKVISVATTNSKDLR
Sbjct: 64  SRSEAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLR 123

Query: 301 NTLPSLIDNEACRVIGRLIAERSKEADVFAMAFEAKKNERIEGRLAIVLDTIKDNGIIFV 122
           NTL SL D+ ACRVIG+LIAERS EADVFAM++E +K+ERIEG+L IVLDTIK+NGIIFV
Sbjct: 124 NTLSSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGIIFV 183


>ref|XP_003570130.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
          Length = 185

 Score =  223 bits (568), Expect = 3e-56
 Identities = 110/163 (67%), Positives = 124/163 (76%)
 Frame = -3

Query: 613 KPLSLSWCXXXXXXXXXXXXXXXXXXXXXLKNKGFVVEAAWTRRSRSEAEKRPNKKSWKQ 434
           +P +LSW                         + FVV AAWTRRSR E EK PN+KSWKQ
Sbjct: 22  RPSTLSWSASITQHRAPLSPRLALSPPPAANRRSFVVRAAWTRRSRGELEKNPNRKSWKQ 81

Query: 433 RTDMYMRPFQLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNTLPSLIDNEACRVIG 254
           RTDMYMRPF LNVFFSKRF+HAKVMHRGTSKVI+VATTN+KDLRNTLPSL+D  ACR IG
Sbjct: 82  RTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRNTLPSLVDENACRTIG 141

Query: 253 RLIAERSKEADVFAMAFEAKKNERIEGRLAIVLDTIKDNGIIF 125
           RLIAERS +ADVFAMA+E KKNER+EG+L IV+DTIK+ GIIF
Sbjct: 142 RLIAERSMDADVFAMAYEPKKNERVEGKLGIVIDTIKEYGIIF 184


>ref|NP_001150881.1| structural constituent of ribosome [Zea mays]
           gi|195642592|gb|ACG40764.1| structural constituent of
           ribosome [Zea mays] gi|413938308|gb|AFW72859.1|
           structural constituent of ribosome [Zea mays]
          Length = 189

 Score =  220 bits (561), Expect = 2e-55
 Identities = 108/129 (83%), Positives = 120/129 (93%)
 Frame = -3

Query: 508 VVEAAWTRRSRSEAEKRPNKKSWKQRTDMYMRPFQLNVFFSKRFIHAKVMHRGTSKVISV 329
           VV AAWTRRSR EAE+RPN+KSWKQRTDMYMRPF LNVFFSKRF+HAKVMHRGTSKVI+V
Sbjct: 61  VVCAAWTRRSRGEAEQRPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAV 120

Query: 328 ATTNSKDLRNTLPSLIDNEACRVIGRLIAERSKEADVFAMAFEAKKNERIEGRLAIVLDT 149
           ATTNSKDLR TLPSL+D+ ACR IGRLIAERS +ADVFAMA+E KKNERIEG+L IV+DT
Sbjct: 121 ATTNSKDLRLTLPSLVDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDT 180

Query: 148 IKDNGIIFV 122
           IK++GIIFV
Sbjct: 181 IKEHGIIFV 189


Top