BLASTX nr result

ID: Atractylodes22_contig00018634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018634
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis ...   127   3e-27
gb|AAW22881.1| putative EARLY flowering 4 protein [Solanum lycop...   120   4e-25
ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002533647.1| conserved hypothetical protein [Ricinus comm...   112   6e-23
gb|ADQ20089.1| ELF4 protein [Manihot esculenta]                       110   3e-22

>ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis vinifera]
           gi|297736609|emb|CBI25480.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  127 bits (318), Expect = 3e-27
 Identities = 68/102 (66%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
 Frame = +1

Query: 199 SATNDRRSDGGVVSDEEQNSKGSQPQ---VVWSNFTDSFRQVQSVLDRNRVLIHQVNENH 369
           SAT D R  G   +DE  +S G   +    VW  F DSFRQVQSVLDRNRVLI QVNENH
Sbjct: 21  SATVDHRRAGFGPADEGDDSGGEAEEGSAEVWETFNDSFRQVQSVLDRNRVLIQQVNENH 80

Query: 370 RSKIHENMVTNVALIQEINNNVSKIASLYSDLSTNFSTVFHQ 495
           +SKI +N+V NVALIQEIN N+SK+ SLYSDLSTNFS VFHQ
Sbjct: 81  QSKIPDNLVKNVALIQEINGNISKVVSLYSDLSTNFSGVFHQ 122


>gb|AAW22881.1| putative EARLY flowering 4 protein [Solanum lycopersicum]
          Length = 121

 Score =  120 bits (300), Expect = 4e-25
 Identities = 63/106 (59%), Positives = 77/106 (72%)
 Frame = +1

Query: 184 LQQPPSATNDRRSDGGVVSDEEQNSKGSQPQVVWSNFTDSFRQVQSVLDRNRVLIHQVNE 363
           L +P S T D R     +S EE NS       VW+NF++ FRQVQSVLDRNR LI QVNE
Sbjct: 12  LAKPQSLTTDDRRRPRDLSTEEGNSD------VWNNFSNRFRQVQSVLDRNRSLIQQVNE 65

Query: 364 NHRSKIHENMVTNVALIQEINNNVSKIASLYSDLSTNFSTVFHQRN 501
           NH+S+  +NMV NV+LIQE+N N+SK+ SLYSD+STNFST+F Q N
Sbjct: 66  NHQSRTTDNMVRNVSLIQELNGNISKVVSLYSDISTNFSTMFRQGN 111


>ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|222851041|gb|EEE88588.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/94 (57%), Positives = 72/94 (76%)
 Frame = +1

Query: 220 SDGGVVSDEEQNSKGSQPQVVWSNFTDSFRQVQSVLDRNRVLIHQVNENHRSKIHENMVT 399
           S+  + +++  N +      VW+ F +SFRQVQSVLDRNRVLI QVNENH+S+  +NMV 
Sbjct: 19  SNPSITTNQNANKEDEVDAEVWATFNNSFRQVQSVLDRNRVLIQQVNENHQSRTPDNMVK 78

Query: 400 NVALIQEINNNVSKIASLYSDLSTNFSTVFHQRN 501
           NV+LIQE+N N+SK+  LYSDL++NFST +HQRN
Sbjct: 79  NVSLIQELNGNISKVVGLYSDLNSNFSTAYHQRN 112


>ref|XP_002533647.1| conserved hypothetical protein [Ricinus communis]
           gi|223526460|gb|EEF28735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score =  112 bits (281), Expect = 6e-23
 Identities = 53/89 (59%), Positives = 70/89 (78%)
 Frame = +1

Query: 238 SDEEQNSKGSQPQVVWSNFTDSFRQVQSVLDRNRVLIHQVNENHRSKIHENMVTNVALIQ 417
           ++++   +   PQV WS F  +FRQVQSVLDRNR LI QVNENH+S+I +NMV NVALIQ
Sbjct: 36  NEDDDEEEAGDPQV-WSTFNTTFRQVQSVLDRNRSLIQQVNENHQSRIPDNMVKNVALIQ 94

Query: 418 EINNNVSKIASLYSDLSTNFSTVFHQRNS 504
           E+N N+SK+ SLYSDL++NFS+ +HQ  +
Sbjct: 95  ELNGNISKVVSLYSDLNSNFSSSYHQHRN 123


>gb|ADQ20089.1| ELF4 protein [Manihot esculenta]
          Length = 115

 Score =  110 bits (275), Expect = 3e-22
 Identities = 52/74 (70%), Positives = 63/74 (85%)
 Frame = +1

Query: 280 VWSNFTDSFRQVQSVLDRNRVLIHQVNENHRSKIHENMVTNVALIQEINNNVSKIASLYS 459
           VWS F  +FRQVQSVLDRNR LI QVNENH+S+I +NMV NVALIQE+N N+SK+ SLYS
Sbjct: 29  VWSTFNSTFRQVQSVLDRNRNLIQQVNENHQSRIPDNMVKNVALIQELNGNISKVVSLYS 88

Query: 460 DLSTNFSTVFHQRN 501
           DL++NF+T + QRN
Sbjct: 89  DLNSNFTTNYQQRN 102


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