BLASTX nr result

ID: Atractylodes22_contig00018567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018567
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP...   196   1e-48
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   196   1e-48
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   194   5e-48
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   191   5e-47
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   191   7e-47

>ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
           [Cucumis sativus]
          Length = 156

 Score =  196 bits (499), Expect = 1e-48
 Identities = 94/136 (69%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   SYQNTQGTQNDDDPNNTTIFVGGLDPNVTDEHLRQVFSQYGQLVHVKIPLGKRCGFVQFA 184
           SYQN QG QN++DPNNTTIFVG LD NVTDEHLRQVF QYG+LVHVKIP+GKRCGFVQFA
Sbjct: 1   SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60

Query: 185 DRSCAEEALRMLQGTQFGGQTVRLSWGRSPSNKQPQVDQSQ-XXXXXXXXXXXXXXXXXA 361
           DR+CAEEALR+L GTQ GGQ +RLSWGRSPSNKQPQ D +Q                  A
Sbjct: 61  DRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYA 120

Query: 362 PVAQDPTMYYGGYAGY 409
           P  QDP M+Y GY GY
Sbjct: 121 PAPQDPNMFYSGYGGY 136


>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
           sativus]
          Length = 404

 Score =  196 bits (499), Expect = 1e-48
 Identities = 94/136 (69%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   SYQNTQGTQNDDDPNNTTIFVGGLDPNVTDEHLRQVFSQYGQLVHVKIPLGKRCGFVQFA 184
           SYQN QG QN++DPNNTTIFVG LD NVTDEHLRQVF QYG+LVHVKIP+GKRCGFVQFA
Sbjct: 249 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 308

Query: 185 DRSCAEEALRMLQGTQFGGQTVRLSWGRSPSNKQPQVDQSQ-XXXXXXXXXXXXXXXXXA 361
           DR+CAEEALR+L GTQ GGQ +RLSWGRSPSNKQPQ D +Q                  A
Sbjct: 309 DRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYA 368

Query: 362 PVAQDPTMYYGGYAGY 409
           P  QDP M+Y GY GY
Sbjct: 369 PAPQDPNMFYSGYGGY 384


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/141 (67%), Positives = 103/141 (73%), Gaps = 6/141 (4%)
 Frame = +2

Query: 5   SYQNTQGTQNDDDPNNTTIFVGGLDPNVTDEHLRQVFSQYGQLVHVKIPLGKRCGFVQFA 184
           SYQN  GTQN++DPNNTTIFVG LD NVTDEHLRQVFSQYG+LVHVKIP GKRCGFVQF+
Sbjct: 249 SYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFS 308

Query: 185 DRSCAEEALRMLQGTQFGGQTVRLSWGRSPSNKQPQVDQSQ------XXXXXXXXXXXXX 346
           DRSCAEEALR+L GT  GGQ +RLSWGRSPSNKQPQ D +Q                   
Sbjct: 309 DRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGGYYGYGQGYE 368

Query: 347 XXXXAPVAQDPTMYYGGYAGY 409
               AP AQDP M+Y GY GY
Sbjct: 369 NYSYAPAAQDPNMFYSGYGGY 389


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/136 (66%), Positives = 103/136 (75%)
 Frame = +2

Query: 2   ASYQNTQGTQNDDDPNNTTIFVGGLDPNVTDEHLRQVFSQYGQLVHVKIPLGKRCGFVQF 181
           AS+QNTQG Q + DPNNTTIFVGGLD NVTD++LRQVFSQYG+LVHVKIP+GKRCGFVQF
Sbjct: 274 ASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQF 333

Query: 182 ADRSCAEEALRMLQGTQFGGQTVRLSWGRSPSNKQPQVDQSQXXXXXXXXXXXXXXXXXA 361
           A+R+CAE+AL  L GTQ G Q++RLSWGRSPSNKQ Q DQ+Q                 A
Sbjct: 334 ANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA 393

Query: 362 PVAQDPTMYYGGYAGY 409
           P  QDP MYYG Y GY
Sbjct: 394 PPPQDPNMYYGAYPGY 409


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  191 bits (484), Expect = 7e-47
 Identities = 91/136 (66%), Positives = 103/136 (75%)
 Frame = +2

Query: 2   ASYQNTQGTQNDDDPNNTTIFVGGLDPNVTDEHLRQVFSQYGQLVHVKIPLGKRCGFVQF 181
           AS+QNTQG Q + DPNNTTIFVGGLD NVTD++LRQVFSQYG+LVHVKIP+GKRCGFVQF
Sbjct: 253 ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQF 312

Query: 182 ADRSCAEEALRMLQGTQFGGQTVRLSWGRSPSNKQPQVDQSQXXXXXXXXXXXXXXXXXA 361
           A+R+CAE+AL  L GTQ G Q++RLSWGRSPSNKQ Q DQ+Q                 A
Sbjct: 313 ANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA 372

Query: 362 PVAQDPTMYYGGYAGY 409
           P  QDP MYYG Y GY
Sbjct: 373 PPPQDPNMYYGAYPGY 388


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