BLASTX nr result

ID: Atractylodes22_contig00018522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018522
         (1654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   670   0.0  
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]   655   0.0  
ref|NP_197059.1| transducin/WD40 domain-containing protein [Arab...   619   e-175
ref|XP_002873732.1| transducin family protein [Arabidopsis lyrat...   610   e-172
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   609   e-172

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis vinifera]
            gi|296082215|emb|CBI21220.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  670 bits (1728), Expect = 0.0
 Identities = 320/408 (78%), Positives = 359/408 (87%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1538 MDIDGDVEDVSRRVQVRFVTKLKPPFKAPTTSIALPSNLTRMGLSAVVNNLLQSGNDDWK 1359
            M+IDGDVE+ SRRVQVRF TKL+ PFK P TSIA+PSNLTRMGLSA+VNNLL+SGN DWK
Sbjct: 1    MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60

Query: 1358 PEPFDFLIDGELVRMSLEDFLLAKGISAEKTLEIEYIKAVAPRKEEDPSLHDDWVSAVDG 1179
            PEPFDFLIDGELVRMSLE FL+AKGISAEK LEIEYIKAVAPRK+E+PSLHDDWVSAVDG
Sbjct: 61   PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120

Query: 1178 SNR-FILTGCYDGLGRIWKAAGVCTHVLEGHNDAITSVGIVKAKDNENDTNMVVATGSKD 1002
            SN  FILTGCYDGLGR+WKAAG CTH+LEGHNDAITSV  +  K  E+  N VVAT SKD
Sbjct: 121  SNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKGLESVNNSVVATASKD 180

Query: 1001 KTVKLWKFDA-EHLAENMKIRAFRTLRGHTASVQSLAAQPTGDMVCSGSWDCRINLWQTE 825
            +T++LWKFDA E     +KIRAF+ L GH ASVQS+A QPTG+MVCSGSWDC INLW+T+
Sbjct: 181  RTLRLWKFDAGERHDLPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTD 240

Query: 824  SND-GGDIVSTKKRKKGDKEEESQSEGEAVSTLVGHTQCVSSVVWPEHGTIYSASWDHSI 648
              D  GD+VS KKRK  ++ EESQ+EGEAVST+VGHTQCVSSV+WP+H TIYSASWDHS+
Sbjct: 241  EFDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSV 300

Query: 647  RRWDVETGKDTLNMFCGKVINCIDVGGESSALIAGGGSDPVLRIWDPRKPGTLAPSFQFS 468
            RRWDVETGKD+ N+FCGK +NC+DVGGESSALIA GGSD  LRIWDPRKPGTL P FQFS
Sbjct: 301  RRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFS 360

Query: 467  SHTSWITACKWHSQSWFHLLSASYDGKVMLWDLRTAWPLAIIDSHEDK 324
            SHTSWI+ACKWH++SWFHLLSASYDGKVMLWDLRTAWPLA+IDSH +K
Sbjct: 361  SHTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNK 408


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score =  655 bits (1690), Expect = 0.0
 Identities = 315/407 (77%), Positives = 354/407 (86%), Gaps = 2/407 (0%)
 Frame = -3

Query: 1538 MDIDGDVEDVSRRVQVRFVTKLKPPFKAPTTSIALPSNLTRMGLSAVVNNLLQSGNDDWK 1359
            M+IDGDVE+ SRRVQVRF TKL+ PFK P TSIA+PSNLTRMGLSA+VNNLL+SGN DWK
Sbjct: 1    MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60

Query: 1358 PEPFDFLIDGELVRMSLEDFLLAKGISAEKTLEIEYIKAVAPRKEEDPSLHDDWVSAVDG 1179
            PEPFDFLIDGELVRMSLE FL+AKGISAEK LEIEYIKAVAPRK+E+PSLHDDWVSAVDG
Sbjct: 61   PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120

Query: 1178 SNR-FILTGCYDGLGRIWKAAGVCTHVLEGHNDAITSVGIVKAKDNENDTNMVVATGSKD 1002
            SN  FILTGCYDGLGR+WKAAG CTH+LEGHNDAITSV  +  K        VVAT SKD
Sbjct: 121  SNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPK--------VVATASKD 172

Query: 1001 KTVKLWKFDAEHLAENMKIRAFRTLRGHTASVQSLAAQPTGDMVCSGSWDCRINLWQTES 822
            +T++LWK  A  +   +KIRAF+ L GH ASVQS+A QPTG+MVCSGSWDC INLW+T+ 
Sbjct: 173  RTLRLWKGSA--MIFPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTDE 230

Query: 821  ND-GGDIVSTKKRKKGDKEEESQSEGEAVSTLVGHTQCVSSVVWPEHGTIYSASWDHSIR 645
             D  GD+VS KKRK  ++ EESQ+EGEAVST+VGHTQCVSSV+WP+H TIYSASWDHS+R
Sbjct: 231  FDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSVR 290

Query: 644  RWDVETGKDTLNMFCGKVINCIDVGGESSALIAGGGSDPVLRIWDPRKPGTLAPSFQFSS 465
            RWDVETGKD+ N+FCGK +NC+DVGGESSALIA GGSD  LRIWDPRKPGTL P FQFSS
Sbjct: 291  RWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFSS 350

Query: 464  HTSWITACKWHSQSWFHLLSASYDGKVMLWDLRTAWPLAIIDSHEDK 324
            HTSWI+ACKWH++SWFHLLSASYDGKVMLWDLRTAWPLA+IDSH +K
Sbjct: 351  HTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNK 397


>ref|NP_197059.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|9755810|emb|CAC01754.1| putative protein [Arabidopsis
            thaliana] gi|17381110|gb|AAL36367.1| unknown protein
            [Arabidopsis thaliana] gi|20258961|gb|AAM14196.1| unknown
            protein [Arabidopsis thaliana]
            gi|332004793|gb|AED92176.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 433

 Score =  619 bits (1595), Expect = e-175
 Identities = 292/408 (71%), Positives = 351/408 (86%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1538 MDIDGDVEDVSRRVQVRFVTKLKPPFKAPTTSIALPSNLTRMGLSAVVNNLLQSGNDDWK 1359
            MDIDG  EDVSRR+ V+FVTKL  PFK P  S+A+PSN+TR+GLS++VN++++S N +WK
Sbjct: 1    MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 58

Query: 1358 PEPFDFLIDGELVRMSLEDFLLAKGISAEKTLEIEYIKAVAPRKEEDPSLHDDWVSAVDG 1179
             EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEE+PSLHDDWVSAV+G
Sbjct: 59   TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 118

Query: 1178 SN-RFILTGCYDGLGRIWKAAGVCTHVLEGHNDAITSVGIVKAKDNENDTNMVVATGSKD 1002
            S+ RFILTGCYDGLGR+W +AG C+H+LEGH+ AI+SV +V + D E  T   VAT SKD
Sbjct: 119  SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVT---VATASKD 175

Query: 1001 KTVKLWKFD-AEHLAENMKIRAFRTLRGHTASVQSLAAQPTGDMVCSGSWDCRINLWQT- 828
            +T++L+KFD AE +    K+RA++ LRGH ASVQS++AQ +G+MVCS SWDC INLW T 
Sbjct: 176  RTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235

Query: 827  ESNDGGDIVSTKKRKKGDKEEESQSEGEAVSTLVGHTQCVSSVVWPEHGTIYSASWDHSI 648
            ES   G+ VS KKRK  ++ EESQSEGEAV++LVGHTQCVSSVVWPEH  IYS+SWDHS+
Sbjct: 236  ESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSV 295

Query: 647  RRWDVETGKDTLNMFCGKVINCIDVGGESSALIAGGGSDPVLRIWDPRKPGTLAPSFQFS 468
            RRWDVETGKD+LN+FCGK +N +DVGGESSALIA GGSDP+LR+WDPRKPGT AP FQFS
Sbjct: 296  RRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFS 355

Query: 467  SHTSWITACKWHSQSWFHLLSASYDGKVMLWDLRTAWPLAIIDSHEDK 324
            SH+SWI+ACKWH  SWFHLLSASYDGK+MLWDLRTAWPL++ID+H DK
Sbjct: 356  SHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDK 403


>ref|XP_002873732.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319569|gb|EFH49991.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 433

 Score =  610 bits (1574), Expect = e-172
 Identities = 286/406 (70%), Positives = 347/406 (85%), Gaps = 3/406 (0%)
 Frame = -3

Query: 1532 IDGDVEDVSRRVQVRFVTKLKPPFKAPTTSIALPSNLTRMGLSAVVNNLLQSGNDDWKPE 1353
            +D D EDVSRR+ V+FVTKL  PFK P  S+A+PSN+TR+GLS++VN++++S N +WK E
Sbjct: 1    MDVDREDVSRRLHVKFVTKLDSPFKVPANSVAIPSNVTRLGLSSIVNSIIESDNPEWKTE 60

Query: 1352 PFDFLIDGELVRMSLEDFLLAKGISAEKTLEIEYIKAVAPRKEEDPSLHDDWVSAVDGSN 1173
            PFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEE+PSLHDDWVSAV+GS+
Sbjct: 61   PFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSS 120

Query: 1172 -RFILTGCYDGLGRIWKAAGVCTHVLEGHNDAITSVGIVKAKDNENDTNMVVATGSKDKT 996
             RFILTGCYDGLGR+W +AG C+H+LEGH+ AI+SV +V + D E  T   VAT SKD+T
Sbjct: 121  PRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVT---VATSSKDRT 177

Query: 995  VKLWKFD-AEHLAENMKIRAFRTLRGHTASVQSLAAQPTGDMVCSGSWDCRINLWQT-ES 822
            ++L+KFD  E +    K+RA++ LRGH ASVQS++AQ +G+MVCS SWDC INLW T ES
Sbjct: 178  LRLFKFDPTESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNES 237

Query: 821  NDGGDIVSTKKRKKGDKEEESQSEGEAVSTLVGHTQCVSSVVWPEHGTIYSASWDHSIRR 642
               G+ VS KKRK  ++ EESQSEGEAV++LVGHTQCVSSVVWPE+  IYS+SWDHS+RR
Sbjct: 238  TSEGESVSVKKRKGNNQGEESQSEGEAVTSLVGHTQCVSSVVWPEYDVIYSSSWDHSVRR 297

Query: 641  WDVETGKDTLNMFCGKVINCIDVGGESSALIAGGGSDPVLRIWDPRKPGTLAPSFQFSSH 462
            WDVETGKD+LN+FCGK +N +DVGGE SALIA GGSDP+LR+WDPRKPGT AP FQFSSH
Sbjct: 298  WDVETGKDSLNLFCGKALNTVDVGGEGSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSH 357

Query: 461  TSWITACKWHSQSWFHLLSASYDGKVMLWDLRTAWPLAIIDSHEDK 324
            +SWI+ACKWH  SWFHLLSASYDGK+MLWDLRTAWPL++ID+H DK
Sbjct: 358  SSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDK 403


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  609 bits (1570), Expect = e-172
 Identities = 293/408 (71%), Positives = 344/408 (84%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1538 MDIDGDVEDVSRRVQVRFVTKLKPPFKAPTTSIALPSNLTRMGLSAVVNNLLQSGNDDWK 1359
            MD+D DVE+  RRVQVRF+TKLKPPFK P TSIA+P+NLTR+GLS +VN+LL++G+D+W+
Sbjct: 1    MDMDSDVEE--RRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDDEWE 58

Query: 1358 PEPFDFLIDGELVRMSLEDFLLAKGISAEKTLEIEYIKAVAPRKEEDPSLHDDWVSAVDG 1179
             +PFDFLIDGELVR+ LE FLLAKGISAEK LEIEY +AV  +KE++PSLHDDWVSAVDG
Sbjct: 59   SQPFDFLIDGELVRLPLEQFLLAKGISAEKVLEIEYTRAVVLQKEDEPSLHDDWVSAVDG 118

Query: 1178 S-NRFILTGCYDGLGRIWKAAGVCTHVLEGHNDAITSVGIVKAKDNENDTNMVVATGSKD 1002
            S  RFILTGCYD LGR+WKAAG CTH+LEGH  AITSV +V   ++E   ++ VAT SKD
Sbjct: 119  SCPRFILTGCYDNLGRVWKAAGECTHILEGHGGAITSVSVV---NSEGTDSVTVATASKD 175

Query: 1001 KTVKLWKFDAE-HLAENMKIRAFRTLRGHTASVQSLAAQPTGDMVCSGSWDCRINLWQT- 828
            +T++LWKFD E HL +  KIRAF+ LRGH A VQS+AA+ +G M+CSGSWDC INLW+T 
Sbjct: 176  ETLRLWKFDTEEHLDQPSKIRAFKILRGHNAPVQSVAAEASGSMICSGSWDCTINLWRTN 235

Query: 827  ESNDGGDIVSTKKRKKGDKEEESQSEGEAVSTLVGHTQCVSSVVWPEHGTIYSASWDHSI 648
            ES+   D+VS KKRK  +K  ESQ EG A+STLVGHTQCVSSV WPE  TIYSASWDHS+
Sbjct: 236  ESDTESDLVSIKKRKVKNKAGESQLEGGALSTLVGHTQCVSSVYWPEPNTIYSASWDHSV 295

Query: 647  RRWDVETGKDTLNMFCGKVINCIDVGGESSALIAGGGSDPVLRIWDPRKPGTLAPSFQFS 468
            RRWDVE GKD  N+FCGK ++C+ VGGE SALIA GGSDP+LR+WDPRKPGT AP +QFS
Sbjct: 296  RRWDVEMGKDLSNIFCGKALHCLHVGGEGSALIAAGGSDPILRVWDPRKPGTSAPIYQFS 355

Query: 467  SHTSWITACKWHSQSWFHLLSASYDGKVMLWDLRTAWPLAIIDSHEDK 324
            SH SWI+ACKWHS+S FHLLSASYDGK+MLWDLRTAWPLAIIDSHEDK
Sbjct: 356  SHNSWISACKWHSESLFHLLSASYDGKLMLWDLRTAWPLAIIDSHEDK 403


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