BLASTX nr result

ID: Atractylodes22_contig00018480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018480
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38961.3| unnamed protein product [Vitis vinifera]              127   1e-36
ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   116   2e-33
ref|XP_002514479.1| nucleic acid binding protein, putative [Rici...   103   2e-28
ref|XP_003538992.1| PREDICTED: zinc finger CCCH domain-containin...   104   7e-28
gb|ACU17592.1| unknown [Glycine max]                                  104   7e-28

>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  127 bits (318), Expect(2) = 1e-36
 Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
 Frame = +3

Query: 1305 KPNPFGFGVQNNS------HIGSKPN*FKPGENKWSRFSPINAGNSSTPQKQ-DNQSSAP 1463
            + NPFGFGVQ+NS        GSK N FKP ENKW+RFSP+  G+SS+  +Q DNQ    
Sbjct: 54   RSNPFGFGVQSNSLPKGTSDFGSKQNHFKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPA 113

Query: 1464 NHVCTDSESCKRQIHEDFEQEKPLWKLTCYGHCK 1565
            NH CTD ESCKRQI EDFE E+P+WKLTCYGHCK
Sbjct: 114  NHKCTDPESCKRQIVEDFEHERPIWKLTCYGHCK 147



 Score = 54.3 bits (129), Expect(2) = 1e-36
 Identities = 26/40 (65%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1195 CQYGERCKFLHVNQQQAKPNPFGFGTQ---NAPHIDSQSQ 1305
            CQYGERCKFLHV QQQ KPN  GFG Q   N  H + Q Q
Sbjct: 14   CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQ 53


>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  116 bits (290), Expect(2) = 2e-33
 Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = +3

Query: 1305 KPNPFGFGVQNNSHIGSKPN*FKPGENKWSRFSPINAGNSSTPQKQ-DNQSSAPNHVCTD 1481
            + NPFGFGVQ+NS         KP ENKW+RFSP+  G+SS+  +Q DNQ    NH CTD
Sbjct: 56   RSNPFGFGVQSNSLP-------KPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTD 108

Query: 1482 SESCKRQIHEDFEQEKPLWKLTCYGHCK 1565
             ESCKRQI EDFE E+P+WKLTCYGHCK
Sbjct: 109  PESCKRQIVEDFEHERPIWKLTCYGHCK 136



 Score = 54.3 bits (129), Expect(2) = 2e-33
 Identities = 26/40 (65%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1195 CQYGERCKFLHVNQQQAKPNPFGFGTQ---NAPHIDSQSQ 1305
            CQYGERCKFLHV QQQ KPN  GFG Q   N  H + Q Q
Sbjct: 16   CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQ 55


>ref|XP_002514479.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223546378|gb|EEF47879.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 282

 Score =  103 bits (258), Expect(2) = 2e-28
 Identities = 50/86 (58%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +3

Query: 1311 NPFGFGVQNNSHIGSKPN*FKPGENKWSRFSPI-NAGNSSTPQKQDNQSSAPNHVCTDSE 1487
            +PFGFG Q+ S         KP ENKW+RFSPI NA  + + ++ DNQ    NH CTD +
Sbjct: 53   SPFGFGTQSKSST-------KPFENKWTRFSPISNAAATPSSRQPDNQPQPANHKCTDPD 105

Query: 1488 SCKRQIHEDFEQEKPLWKLTCYGHCK 1565
            SCKRQI EDF+ EKPLWKLTCYGH K
Sbjct: 106  SCKRQIAEDFQNEKPLWKLTCYGHSK 131



 Score = 50.1 bits (118), Expect(2) = 2e-28
 Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1195 CQYGERCKFLHVN--QQQAKPNPFGFGTQNAPHIDSQS 1302
            CQYGERCKFLHVN  QQQ+  N FGFG+Q      S S
Sbjct: 16   CQYGERCKFLHVNNQQQQSNNNSFGFGSQQKQQNQSSS 53


>ref|XP_003538992.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
            [Glycine max]
          Length = 279

 Score =  104 bits (259), Expect(2) = 7e-28
 Identities = 54/97 (55%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
 Frame = +3

Query: 1305 KPNPFGFGVQNNS------HIGSKPN*FKPGENKWSRFSPINAGNSSTPQ----KQDNQS 1454
            K NPFGFG QN+S      H   KPN +KP ENKW+R        SS PQ    K +N S
Sbjct: 63   KGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNR-------QSSKPQQNGVKSENNS 115

Query: 1455 SAPNHVCTDSESCKRQIHEDFEQEKPLWKLTCYGHCK 1565
               +H+CTD E+CKRQI  DFEQEKPLW LTCY HCK
Sbjct: 116  KQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCK 152



 Score = 47.8 bits (112), Expect(2) = 7e-28
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +1

Query: 1195 CQYGERCKFLHVNQQQAKPNPFGFGTQNAPHIDSQSQNP 1311
            CQYGERC++LHV QQQ KPN  GFG Q++ +   Q+ NP
Sbjct: 13   CQYGERCRYLHV-QQQRKPNVNGFGGQSSSY-QQQNTNP 49


>gb|ACU17592.1| unknown [Glycine max]
          Length = 197

 Score =  104 bits (259), Expect(2) = 7e-28
 Identities = 54/97 (55%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
 Frame = +3

Query: 1305 KPNPFGFGVQNNS------HIGSKPN*FKPGENKWSRFSPINAGNSSTPQ----KQDNQS 1454
            K NPFGFG QN+S      H   KPN +KP ENKW+R        SS PQ    K +N S
Sbjct: 63   KGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNR-------QSSKPQQNGVKSENNS 115

Query: 1455 SAPNHVCTDSESCKRQIHEDFEQEKPLWKLTCYGHCK 1565
               +H+CTD E+CKRQI  DFEQEKPLW LTCY HCK
Sbjct: 116  KQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCK 152



 Score = 47.8 bits (112), Expect(2) = 7e-28
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +1

Query: 1195 CQYGERCKFLHVNQQQAKPNPFGFGTQNAPHIDSQSQNP 1311
            CQYGERC++LHV QQQ KPN  GFG Q++ +   Q+ NP
Sbjct: 13   CQYGERCRYLHV-QQQRKPNVNGFGGQSSSY-QQQNTNP 49


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