BLASTX nr result

ID: Atractylodes22_contig00018461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018461
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus...   186   2e-45
ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arab...   175   4e-42
ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homol...   174   5e-42
ref|XP_004154083.1| PREDICTED: nucleolar complex protein 4 homol...   174   5e-42

>ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis]
           gi|223529279|gb|EEF31250.1| nucleolar complex protein,
           putative [Ricinus communis]
          Length = 652

 Score =  186 bits (471), Expect = 2e-45
 Identities = 93/131 (70%), Positives = 103/131 (78%)
 Frame = +1

Query: 1   NGETAKDVSSIKPGIDHFNNEETDLLKTNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 180
           N       S+ KPGID FNNEE   +K++A+RSSLWEIDTL HHYCPPVSRFVLSLENDL
Sbjct: 502 NSRNGSHASARKPGIDRFNNEECSPIKSSALRSSLWEIDTLSHHYCPPVSRFVLSLENDL 561

Query: 181 TVRFKTTEVAIKDFSSGSYATIFREEIRRRVKQVPLAFYKAIPTSLFSESDFGGWSFQSG 360
           TVR KTTEV I DFSS SYATIF EE+RRRVKQVPLAF+KA PTSLFSESDF GW+F+  
Sbjct: 562 TVRKKTTEVNINDFSSSSYATIFEEELRRRVKQVPLAFFKATPTSLFSESDFAGWTFK-- 619

Query: 361 **YRSSEEIDA 393
             Y  S+  DA
Sbjct: 620 --YEQSKRNDA 628


>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/112 (77%), Positives = 103/112 (91%)
 Frame = +1

Query: 19  DVSSIKPGIDHFNNEETDLLKTNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRFKT 198
           ++++ K GIDHF+NEE++ LK++A+ SSLWEID+LRHHYCPPVSRFV SLENDLTVR KT
Sbjct: 460 NIAARKAGIDHFDNEESNPLKSHALGSSLWEIDSLRHHYCPPVSRFVQSLENDLTVRAKT 519

Query: 199 TEVAIKDFSSGSYATIFREEIRRRVKQVPLAFYKAIPTSLFSESDFGGWSFQ 354
           TEV ++DFSSGSYATIF EEIRRRVKQVP+AFYKAIPTSLFSE+DF GWSF+
Sbjct: 520 TEVNVEDFSSGSYATIFGEEIRRRVKQVPVAFYKAIPTSLFSETDFSGWSFK 571


>ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp.
           lyrata] gi|297329884|gb|EFH60303.1| hypothetical protein
           ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/117 (70%), Positives = 98/117 (83%)
 Frame = +1

Query: 1   NGETAKDVSSIKPGIDHFNNEETDLLKTNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 180
           N    K +   K GID+FNN+E+D  K+ A++SSLWEIDTLRHHYCPPVSRF+ SLE +L
Sbjct: 457 NESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNL 516

Query: 181 TVRFKTTEVAIKDFSSGSYATIFREEIRRRVKQVPLAFYKAIPTSLFSESDFGGWSF 351
           T+R KTTE+ I+DFSSGSYATIF +EIRRRVKQVPLAFYK +PTSLF++SDF GWSF
Sbjct: 517 TIRSKTTEMKIEDFSSGSYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWSF 573


>ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis
           sativus]
          Length = 608

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/133 (63%), Positives = 106/133 (79%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  TAKDVSSIKPGIDHFNNEETDLLKTNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 189
           T  D   +KPGIDHFN EE D +K++A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR
Sbjct: 470 TDADTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVR 529

Query: 190 FKTTEVAIKDFSSGSYATIFREEIRRRVKQVPLAFYKAIPTSLFSESDFGGWSF---QSG 360
            KTTE+ +KDF +GSY+TI  +E+++++K+VPLAFY+A PT+LFSESDF GWSF    S 
Sbjct: 530 SKTTEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSFDNEHSE 589

Query: 361 **YRSSEEIDAKR 399
               SS+ + AKR
Sbjct: 590 KNIDSSDHLSAKR 602


>ref|XP_004154083.1| PREDICTED: nucleolar complex protein 4 homolog B-like, partial
           [Cucumis sativus]
          Length = 419

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/133 (63%), Positives = 106/133 (79%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  TAKDVSSIKPGIDHFNNEETDLLKTNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 189
           T  D   +KPGIDHFN EE D +K++A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR
Sbjct: 281 TDADTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVR 340

Query: 190 FKTTEVAIKDFSSGSYATIFREEIRRRVKQVPLAFYKAIPTSLFSESDFGGWSF---QSG 360
            KTTE+ +KDF +GSY+TI  +E+++++K+VPLAFY+A PT+LFSESDF GWSF    S 
Sbjct: 341 SKTTEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSFDNEHSE 400

Query: 361 **YRSSEEIDAKR 399
               SS+ + AKR
Sbjct: 401 KNIDSSDHLSAKR 413


Top