BLASTX nr result

ID: Atractylodes22_contig00018325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018325
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   264   3e-68
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              264   3e-68
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     248   2e-63
ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subu...   236   7e-60
ref|XP_003541521.1| PREDICTED: replication factor A protein 2-li...   220   6e-55

>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  264 bits (675), Expect = 3e-68
 Identities = 135/212 (63%), Positives = 160/212 (75%)
 Frame = -3

Query: 921 MPSQATQTTDHSPSSFSKNRDTQTLIPLTVKQISKALLSNDDKVNFLIDGVDVNNVKLAG 742
           MPSQATQ  +   S  ++NRDTQ L+PLTVKQIS+A LS+DDK NFLIDGV+VNNV L G
Sbjct: 19  MPSQATQAAEPGFSP-ARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVG 77

Query: 741 MVLNKAERVTDVSFVLDDGTGRIDCNKWVHEPVDTKEMEAIMNGTYVRVHGQLKGFQGKK 562
           MV NKAERVTDV F+LDDGTGRIDCN+WV+E VDTKEME I++G YVRVHG LKGFQGK+
Sbjct: 78  MVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKR 137

Query: 561 QLVIFGIKPVTDFDEITHHFVECIYVHSHNTKLMKXXXXXXXXXXXXXXSVKAEAYQTAP 382
            L +F I+PVTDF+EI  HF+ECIYVH +NTK  +                  + YQ + 
Sbjct: 138 HLNVFSIRPVTDFNEIASHFIECIYVHIYNTK-SRAGGPTQSHVTNPAIGTPLKGYQASQ 196

Query: 381 SNQFTGQYVADGLKGIDKLVVDYLQQPGSLKR 286
            NQF+GQY A GLKG+D+LV+DYLQQP SL R
Sbjct: 197 PNQFSGQYGA-GLKGVDQLVIDYLQQPQSLAR 227


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  264 bits (674), Expect = 3e-68
 Identities = 135/213 (63%), Positives = 161/213 (75%), Gaps = 1/213 (0%)
 Frame = -3

Query: 921 MPSQATQTTDHSPSSFSKNRDTQTLIPLTVKQISKALLSNDDKVNFLIDGVDVNNVKLAG 742
           MPSQATQ  +   S  ++NRDTQ L+PLTVKQIS+A LS+DDK NFLIDGV+VNNV L G
Sbjct: 19  MPSQATQAAEPGFSP-ARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVG 77

Query: 741 MVLNKAERVTDVSFVLDDGTGRIDCNKWVHEPVDTKEMEAIMNGTYVRVHGQLKGFQGKK 562
           MV NKAERVTDV F+LDDGTGRIDCN+WV+E VDTKEME I++G YVRVHG LKGFQGK+
Sbjct: 78  MVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKR 137

Query: 561 QLVIFGIKPVTDFDEITHHFVECIYVHSHNTK-LMKXXXXXXXXXXXXXXSVKAEAYQTA 385
            L +F I+PVTDF+EI  HF+ECIYVH +NTK  ++                  + YQ +
Sbjct: 138 HLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVTNPAIGTPLKGYQAS 197

Query: 384 PSNQFTGQYVADGLKGIDKLVVDYLQQPGSLKR 286
             NQF+GQY A GLKG+D+LV+DYLQQP SL R
Sbjct: 198 QPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLAR 229


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  248 bits (633), Expect = 2e-63
 Identities = 127/212 (59%), Positives = 155/212 (73%), Gaps = 2/212 (0%)
 Frame = -3

Query: 921 MPSQATQTTDHSPSSFSKNRDTQTLIPLTVKQISKALLSNDDKVNFLIDGVDVNNVKLAG 742
           MPSQATQT      S +KNRD+QTLIPLTVKQIS+A  S+DDK NFLIDGVDVNNVKL G
Sbjct: 39  MPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTNFLIDGVDVNNVKLVG 98

Query: 741 MVLNKAERVTDVSFVLDDGTGRIDCNKWVHEPVDTKEMEAIMNGTYVRVHGQLKGFQGKK 562
           ++ NKAE +T VSFV+DDGTGR+DC +WV+E VDTKEMEA+ NG YVRVHG LKGFQGKK
Sbjct: 99  ILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGIYVRVHGHLKGFQGKK 158

Query: 561 QLVIFGIKPVTDFDEITHHFVECIYVHSHNTKLMKXXXXXXXXXXXXXXSVKA--EAYQT 388
           QL+ + ++PV D++EI  HF E IYVHS+N++L K              S     + YQ 
Sbjct: 159 QLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQVPSSSFNTPLKGYQA 218

Query: 387 APSNQFTGQYVADGLKGIDKLVVDYLQQPGSL 292
           + SNQF G +  DG+ G+ K+V+DYLQQP  L
Sbjct: 219 SASNQFPG-FNMDGIGGVHKMVLDYLQQPSCL 249


>ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
           sativus] gi|449500253|ref|XP_004161048.1| PREDICTED:
           replication protein A 32 kDa subunit B-like [Cucumis
           sativus]
          Length = 277

 Score =  236 bits (602), Expect = 7e-60
 Identities = 118/209 (56%), Positives = 151/209 (72%), Gaps = 2/209 (0%)
 Frame = -3

Query: 921 MPSQATQTTDHSPSSFSKNRDTQTLIPLTVKQISKALLSNDDKVNFLIDGVDVNNVKLAG 742
           MPSQ TQ  DHS S  +KNRD Q L+PLTVKQI+ A LS+DDK NF+IDGVDVNNVKL G
Sbjct: 18  MPSQTTQAPDHSFSP-AKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVG 76

Query: 741 MVLNKAERVTDVSFVLDDGTGRIDCNKWVHEPVDTKEMEAIMNGTYVRVHGQLKGFQGKK 562
           MV N+A R+TDV+F LDDGTGRIDC+KWV+E  D+ E+E I++G YVRVHG LK FQGK+
Sbjct: 77  MVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKR 136

Query: 561 QLVIFGIKPVTDFDEITHHFVECIYVHSHNTKLMK--XXXXXXXXXXXXXXSVKAEAYQT 388
            L +F I+PVTD++EIT+HF+E IYVH +NT+L K                +   + YQ 
Sbjct: 137 TLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQA 196

Query: 387 APSNQFTGQYVADGLKGIDKLVVDYLQQP 301
             +NQ+TGQ   D  K ++++V+D+LQ P
Sbjct: 197 PIANQYTGQAGGDSWKSLEQMVLDFLQLP 225


>ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 277

 Score =  220 bits (560), Expect = 6e-55
 Identities = 117/216 (54%), Positives = 149/216 (68%), Gaps = 4/216 (1%)
 Frame = -3

Query: 921 MPSQATQTTDHSPSSF--SKNRDTQTLIPLTVKQISKALLSNDDKVNFLIDGVDVNNVKL 748
           MPSQ TQ  D   SSF  SKNRD Q+L+PLTVKQI  A  S+DDK+N +IDGVDV NV L
Sbjct: 20  MPSQTTQGPD---SSFVPSKNRDAQSLLPLTVKQIYDASQSSDDKINLIIDGVDVTNVTL 76

Query: 747 AGMVLNKAERVTDVSFVLDDGTGRIDCNKWVHEPVDTKEMEAIMNGTYVRVHGQLKGFQG 568
            G V NKA R+TDV+FVLDDGTGRI+CNKW+HE VDT E EAI+ G Y R+HGQLK FQG
Sbjct: 77  VGRVSNKAGRITDVTFVLDDGTGRIECNKWLHEAVDTNEAEAILEGMYARLHGQLKHFQG 136

Query: 567 KKQLVIFGIKPVTDFDEITHHFVECIYVHSHNTKLMKXXXXXXXXXXXXXXSVKAEAYQT 388
           K+ L +F  +PVTDF+EI  HF +CIYVH +N+KL +              ++  +A   
Sbjct: 137 KRTLNVFSFRPVTDFNEIASHFTDCIYVHLYNSKL-RTSVPNQQHSSPIPPTIGYQAQVV 195

Query: 387 APSNQFTGQYVADGLKG--IDKLVVDYLQQPGSLKR 286
            P+NQF+ Q+V +G KG  ++ +V+D+L  P +  R
Sbjct: 196 PPTNQFSDQHV-NGQKGVTVEAMVLDFLHHPANSSR 230


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