BLASTX nr result

ID: Atractylodes22_contig00018301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018301
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...    57   2e-06
ref|XP_003625462.1| Photosystem I reaction center subunit IV A [...    56   3e-06
gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK...    55   6e-06

>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +2

Query: 92  MASCSMASAATGFVVTPNLISNT-TTVKCNMVMLPL--HNTRGSRLVVRAAEE 241
           MASCSMASAA+GF++TPN+ +NT ++ + NMV  P   +N   SRLVVRAAEE
Sbjct: 1   MASCSMASAASGFLLTPNVPANTNSSSRSNMVYFPSKNNNINNSRLVVRAAEE 53


>ref|XP_003625462.1| Photosystem I reaction center subunit IV A [Medicago truncatula]
           gi|355500477|gb|AES81680.1| Photosystem I reaction
           center subunit IV A [Medicago truncatula]
           gi|388502410|gb|AFK39271.1| unknown [Medicago
           truncatula]
          Length = 138

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
 Frame = +2

Query: 92  MASCSMASAATGFVVTPNLISNTTTV-----KCNMVMLPLHNTRGSRLVVRAAEE 241
           MASC+MASAA+GFV++PN +S  T       + NMVM P      SRLVVRA+EE
Sbjct: 1   MASCNMASAASGFVLSPNNVSGNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEE 55


>gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK46371.1| unknown
           [Medicago truncatula]
          Length = 138

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +2

Query: 92  MASCSMASAATGFVVTPNLIS-NTTT----VKCNMVMLPLHNTRGSRLVVRAAEE 241
           MASC+MASAA+GFV++PN +S NT T     + NMVM P      SRLVVRA+EE
Sbjct: 1   MASCNMASAASGFVLSPNNVSCNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEE 55


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