BLASTX nr result

ID: Atractylodes22_contig00018266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018266
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...   278   1e-72
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   265   1e-68
ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|2...   250   5e-64
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   247   5e-63
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   246   8e-63

>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score =  278 bits (712), Expect = 1e-72
 Identities = 150/247 (60%), Positives = 173/247 (70%), Gaps = 13/247 (5%)
 Frame = -3

Query: 703 PNKPPTGKLIKRGEEIIKCDYSTQLSLDVSNNDGEVAETGLDCNRVGD----------DA 554
           PNKPPTGK+ +R +E       ++ S   ++  G    TG +C+   D          D 
Sbjct: 179 PNKPPTGKMCRRVDETRGDSTKSEPSFGRNSFSGSGNGTGGECDEDSDCNVVARTVPHDQ 238

Query: 553 VCTIKNLDNGKEFVVDEVREDGMWGKLKEVGTGRHLTMEEFEMCVGHSPIVQELMRRQNV 374
           VCTIKNLDNGKEFVV+E+REDGMW KLKEVGT R LTMEEFEMCVGHSPIVQELMRRQNV
Sbjct: 239 VCTIKNLDNGKEFVVNELREDGMWNKLKEVGTDRQLTMEEFEMCVGHSPIVQELMRRQNV 298

Query: 373 EAGNKDSPD---TXXXXXXXXXXXXXXXXXSIRNVANSVAGYKXXXXXXXXXXXXEKGGR 203
           E GNKD+ D                     SIR+VA+SV G++            EKGGR
Sbjct: 299 EEGNKDNLDINVNGGVGGGSKLKKKGGWFKSIRSVASSVTGHRERRSSDERDTSSEKGGR 358

Query: 202 RYSSATDDSQDVSFHGPERVRVRQYGKSCKDLTALYKSQEIQAHSGSIWTIKFSVDGKYL 23
           R SSATDDSQ+VSFHGPER+RVRQYGKSCK+LTALYKSQEIQAH+GSIW+IKFS+DG+YL
Sbjct: 359 RSSSATDDSQEVSFHGPERIRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGRYL 418

Query: 22  ASAGEDC 2
           ASAGEDC
Sbjct: 419 ASAGEDC 425


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449498657|ref|XP_004160597.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  265 bits (678), Expect = 1e-68
 Identities = 187/414 (45%), Positives = 221/414 (53%), Gaps = 35/414 (8%)
 Frame = -3

Query: 1141 PIPKFPMGVANNYDVWISRPSSVDEXXXXXXXXXXXXXXRPXXXXXXXXXLVK------- 983
            PIPKFPM V+N YD+WIS P+SV E                         L         
Sbjct: 53   PIPKFPMAVSN-YDIWISEPASVLERRSRLLREMGLSGDPSLSRANTALELDHKEKGVGD 111

Query: 982  FG---SADHLTRDTHQTXXXXXXXXXXXXXXS-------ADRQHRNSSSNLDSHQEILSI 833
            FG   S+D+LT    Q               +       A     N+  N  S     SI
Sbjct: 112  FGRSVSSDYLTSQQQQPPAIIRSKSDGSADCNRNMSSSQASGSDTNNQCNYSSSISSPSI 171

Query: 832  RSFSSPVADTVPTTAVSKNVVNLVLVEXXXXXXXXXXXXXXXSPNKPPTGKLIKRGEEII 653
             SF S V +T  TT+ + N   +V+                 S +KPP+GK  +  +E  
Sbjct: 172  LSFHS-VNET--TTSFANNRNRVVVKSRSCKSDGAPSVSFAASQHKPPSGKNCRWADE-- 226

Query: 652  KCDYSTQLSLDVSNNDGE----VAETGLDCNRVGDDAVC-----------TIKNLDNGKE 518
                S   SL V+ N       +++ G++   V  D+VC           TIK+LDNGKE
Sbjct: 227  ----SRSDSLVVNANSDPDPSLMSQNGVNRREVSGDSVCSTSGKVNEEACTIKDLDNGKE 282

Query: 517  FVVDEVREDGMWGKLKEVGTGRHLTMEEFEMCVGHSPIVQELMRRQNVEAGNKDSPD--- 347
            FVV+E+ EDGMW KLKEVGTGR LTMEEFEMCVGHSPIVQELMRRQNVE G  D+ D   
Sbjct: 283  FVVNEITEDGMWNKLKEVGTGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGCNDNNDLNA 342

Query: 346  TXXXXXXXXXXXXXXXXXSIRNVANSVAGYKXXXXXXXXXXXXEKGGRRYSSATDDSQDV 167
                              SI++VA++V G K            EKGGRR SSATDDSQDV
Sbjct: 343  NGDTGSSSKLKKKGGWFKSIKSVASTVKGQKERRSSDERDTSSEKGGRRSSSATDDSQDV 402

Query: 166  SFHGPERVRVRQYGKSCKDLTALYKSQEIQAHSGSIWTIKFSVDGKYLASAGED 5
            SFHGPERVRVRQYGKS K+L+ALYKSQEIQAHSGSIWTIKFS+DGKYLASAGED
Sbjct: 403  SFHGPERVRVRQYGKSSKELSALYKSQEIQAHSGSIWTIKFSLDGKYLASAGED 456


>ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|222860577|gb|EEE98124.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  250 bits (638), Expect = 5e-64
 Identities = 138/237 (58%), Positives = 159/237 (67%), Gaps = 4/237 (1%)
 Frame = -3

Query: 700 NKPPTGKLIKRGEEIIKCDYSTQLSLDVSNNDGEVAETGLDCNRVGDDAVCTIKNLDNGK 521
           N     KL   G  ++ C   ++     S  DG  +         G+  VCTIKNLDNGK
Sbjct: 193 NNINNSKLSNNGFGVVGCGKKSKSKNGASPKDGSSSVAA-----EGEVEVCTIKNLDNGK 247

Query: 520 EFVVDEVREDGMWGKLKEVGTGRHLTMEEFEMCVGHSPIVQELMRRQNVEAGNKDSPDTX 341
           EFVV+E+REDGMW KLKEVGTGR LTMEEFEM VGHSPIVQELMRRQNVE G + + D+ 
Sbjct: 248 EFVVNEIREDGMWNKLKEVGTGRQLTMEEFEMSVGHSPIVQELMRRQNVEDGTRGNLDSN 307

Query: 340 XXXXXXXXXXXXXXXXS----IRNVANSVAGYKXXXXXXXXXXXXEKGGRRYSSATDDSQ 173
                           S    IR+VANSV  +K            E+GGRR SSATDDSQ
Sbjct: 308 ANGGIGGGVTKFKKKGSWFGSIRSVANSVTRHKERRSSDERDTGSERGGRRSSSATDDSQ 367

Query: 172 DVSFHGPERVRVRQYGKSCKDLTALYKSQEIQAHSGSIWTIKFSVDGKYLASAGEDC 2
           DVSFHGPERVRVRQYG+S K+L+ALYKSQEIQAH+GSIW+IKFS+DG+YLASAGEDC
Sbjct: 368 DVSFHGPERVRVRQYGRSSKELSALYKSQEIQAHNGSIWSIKFSLDGRYLASAGEDC 424


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
            gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 944

 Score =  247 bits (630), Expect = 5e-63
 Identities = 181/416 (43%), Positives = 217/416 (52%), Gaps = 37/416 (8%)
 Frame = -3

Query: 1138 IPKFPMGVANNYDVWISRPSSVDEXXXXXXXXXXXXXXRPXXXXXXXXXLVKFGSADHLT 959
            +PKF     + YDVWIS P+SV E              R            +  S+DHL+
Sbjct: 87   VPKF-----SGYDVWISEPASVSERRERLLHQMGLASDRAKPG--------RSASSDHLS 133

Query: 958  RD-------THQTXXXXXXXXXXXXXXSADRQHRNSSSNLDSHQEILSIRSFSSPVADTV 800
            R+       +                   DR   + +S   S   + S R  S  + D  
Sbjct: 134  REQPGPGPGSCSGCGIVRSKSDGGGGSRLDRDDGDFNSCSSSLLSVYSPRILSHDLMDVN 193

Query: 799  PTTAV----SKNVVNLVLVEXXXXXXXXXXXXXXXSPNKPPTGKLIKRGEEIIKCDYSTQ 632
               +     + N  N V+V                SPNKPP+GK   R  ++ + D ST 
Sbjct: 194  KCNSNVGDDNNNSNNAVVV---GGDGSKRTLNASLSPNKPPSGKFNGRKMDVTRSD-STN 249

Query: 631  LSLDVSNND--GEVAETGLDCNRVG--DDA-----------------VCTIKNLDNGKEF 515
             + +++ N   GE+ E  LDCN VG  DD                  VCTIKNLDNGKEF
Sbjct: 250  SNGNLNGNWSLGELGEE-LDCNGVGRVDDTTRTSTTTITTSEAESTQVCTIKNLDNGKEF 308

Query: 514  VVDEVREDGMWGKLKEVGTGRHLTMEEFEMCVGHSPIVQELMRRQNVEAGNKDSPDTXXX 335
            V++E+REDG   KLKEVGTGR LTMEEFEM VGHSPIVQELMRRQ VE G ++S D+   
Sbjct: 309  VINEIREDGTLNKLKEVGTGRQLTMEEFEMSVGHSPIVQELMRRQIVEDGTRESLDSNNN 368

Query: 334  XXXXXXXXXXXXXXS----IRNVANSVAGY-KXXXXXXXXXXXXEKGGRRYSSATDDSQD 170
                          S    IR+VA  V G  K            EKGGRR SSATDDSQD
Sbjct: 369  GGVGSGVSKLKKKGSWFRSIRSVATGVKGNNKERRSSDERDTGSEKGGRRSSSATDDSQD 428

Query: 169  VSFHGPERVRVRQYGKSCKDLTALYKSQEIQAHSGSIWTIKFSVDGKYLASAGEDC 2
             SFHGPERVRVRQYGKS K+L+ALYKSQEIQAH+GSIW IKFS+DG+YLASAGEDC
Sbjct: 429  TSFHGPERVRVRQYGKSFKELSALYKSQEIQAHNGSIWCIKFSLDGRYLASAGEDC 484


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  246 bits (628), Expect = 8e-63
 Identities = 133/219 (60%), Positives = 156/219 (71%), Gaps = 4/219 (1%)
 Frame = -3

Query: 646 DYSTQLSLDVSNNDGEVAETGLDCNRVGDDAVCTIKNLDNGKEFVVDEVREDGMWGKLKE 467
           +++ +L+ ++  N G+     +D    G   VCTIKNLDNGKEFVV+E+REDGMW KLKE
Sbjct: 125 EFAEELAEELECNGGDTDGAVVD---EGGSRVCTIKNLDNGKEFVVNEIREDGMWNKLKE 181

Query: 466 VGTGRHLTMEEFEMCVGHSPIVQELMRRQNVEAGNKDSPDTXXXXXXXXXXXXXXXXXS- 290
           VGTGR LTMEEFEM VGHSPIVQELMRRQ VE G +++ D                  S 
Sbjct: 182 VGTGRQLTMEEFEMSVGHSPIVQELMRRQIVEDGTRENLDADANGGIGGGVSKFKKKGSW 241

Query: 289 ---IRNVANSVAGYKXXXXXXXXXXXXEKGGRRYSSATDDSQDVSFHGPERVRVRQYGKS 119
              I++VANSV G K            EKGGRR SSATDDSQDVSFHGPERVRVRQYG+ 
Sbjct: 242 FRSIKSVANSVTGNKERRSSDERDTGSEKGGRRSSSATDDSQDVSFHGPERVRVRQYGRP 301

Query: 118 CKDLTALYKSQEIQAHSGSIWTIKFSVDGKYLASAGEDC 2
            K+L+ALYKSQEIQAH+GSIW+IKFS+DG+YLASAGEDC
Sbjct: 302 SKELSALYKSQEIQAHNGSIWSIKFSLDGRYLASAGEDC 340


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