BLASTX nr result

ID: Atractylodes22_contig00018260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018260
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   107   1e-21
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   100   9e-20
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...    92   3e-17
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...    89   5e-16
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...    89   5e-16

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/82 (64%), Positives = 63/82 (76%)
 Frame = +1

Query: 1   DERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICTHTELCPSDVRASLWS 180
           +ER+LYD+ME++ K  +  +I  GSV  NYSTVL IILRLRQICT   LCPSD+R+ L S
Sbjct: 543 EERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICTDVALCPSDLRSLLLS 602

Query: 181 YNFEDASNNPELLKKLVLQLQD 246
            N ED SNNPELLKK+VL LQD
Sbjct: 603 NNIEDVSNNPELLKKMVLVLQD 624


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/82 (63%), Positives = 61/82 (74%)
 Frame = +1

Query: 1   DERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICTHTELCPSDVRASLWS 180
           +ER+LYD+ME +AK  V   I  GS+T NYSTVL IILRLRQIC    LCPSD+RA L S
Sbjct: 32  EERELYDQMEGEAKGVVQGFINAGSLTCNYSTVLCIILRLRQICNDLALCPSDLRALLPS 91

Query: 181 YNFEDASNNPELLKKLVLQLQD 246
            + ED SNNPELL+K+V  LQD
Sbjct: 92  NSIEDVSNNPELLEKVVAVLQD 113


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/82 (57%), Positives = 60/82 (73%)
 Frame = +1

Query: 1   DERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICTHTELCPSDVRASLWS 180
           +ER+LYD+ME++AK  V + I   ++  N+STVL IILRLRQIC    LCPSD+R+ L S
Sbjct: 468 EERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLRQICNDLALCPSDLRSLLPS 527

Query: 181 YNFEDASNNPELLKKLVLQLQD 246
            + ED SNNPELL K+V  LQD
Sbjct: 528 NSIEDVSNNPELLMKMVTVLQD 549


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
           helicase-like transcription factor-like protein
           [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
           At5g05130 [Arabidopsis thaliana]
           gi|332003449|gb|AED90832.1| DNA/RNA helicase
           [Arabidopsis thaliana]
          Length = 862

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%)
 Frame = +1

Query: 1   DERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICTHTELCPSDVRASLWS 180
           +ER+LYD ME +AK  V + I  GS+  NYSTVLSIILRLRQ+C    LCP ++R+   S
Sbjct: 529 EERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTS 588

Query: 181 YNFEDASNNPELLKKLVLQLQD 246
            + ED ++ PELL+KLV  LQD
Sbjct: 589 TSVEDVTDKPELLQKLVAALQD 610


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1; Short=SMARCA3-like protein 1
           gi|10178052|dbj|BAB11535.1| helicase-like transcription
           factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%)
 Frame = +1

Query: 1   DERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICTHTELCPSDVRASLWS 180
           +ER+LYD ME +AK  V + I  GS+  NYSTVLSIILRLRQ+C    LCP ++R+   S
Sbjct: 548 EERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTS 607

Query: 181 YNFEDASNNPELLKKLVLQLQD 246
            + ED ++ PELL+KLV  LQD
Sbjct: 608 TSVEDVTDKPELLQKLVAALQD 629


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