BLASTX nr result

ID: Atractylodes22_contig00018255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018255
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319588.1| predicted protein [Populus trichocarpa] gi|1...   280   3e-73
ref|XP_002269746.1| PREDICTED: trafficking protein particle comp...   276   3e-72
ref|XP_004135644.1| PREDICTED: trafficking protein particle comp...   276   4e-72
gb|AEC10988.1| trafficking protein [Camellia sinensis]                275   1e-71
ref|XP_002512289.1| trafficking protein particle complex subunit...   271   2e-70

>ref|XP_002319588.1| predicted protein [Populus trichocarpa] gi|118483652|gb|ABK93720.1|
           unknown [Populus trichocarpa]
           gi|118485646|gb|ABK94673.1| unknown [Populus
           trichocarpa] gi|222857964|gb|EEE95511.1| predicted
           protein [Populus trichocarpa]
          Length = 169

 Score =  280 bits (715), Expect = 3e-73
 Identities = 140/171 (81%), Positives = 147/171 (85%)
 Frame = -3

Query: 729 MAREVSESCLDSLLTEIVSSYCNVLYATKPELAARRIEAIGYHVGHQLSERYTMERPRFN 550
           M REVSESC+DSLLTE+VSSYCN  Y+  PELAARRIEAIGY VGHQLSERYTMERPRF 
Sbjct: 1   MGREVSESCIDSLLTEMVSSYCNRFYSNTPELAARRIEAIGYQVGHQLSERYTMERPRFT 60

Query: 549 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDDKFAWLSRMSGDPSIEISGXXXX 370
           DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQD+KF WLSRMSGDPS+E       
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDNKFRWLSRMSGDPSVE--NGTQD 118

Query: 369 XXXXXXXATGMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIKV 217
                  A  M+LYFPCGIIRGALSNLGIPCAVSADIS+LPACSFVIRIKV
Sbjct: 119 PESKAAQAMSMYLYFPCGIIRGALSNLGIPCAVSADISSLPACSFVIRIKV 169


>ref|XP_002269746.1| PREDICTED: trafficking protein particle complex subunit 6B [Vitis
           vinifera] gi|147767146|emb|CAN75647.1| hypothetical
           protein VITISV_031270 [Vitis vinifera]
           gi|298204986|emb|CBI34293.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  276 bits (707), Expect = 3e-72
 Identities = 139/173 (80%), Positives = 148/173 (85%), Gaps = 3/173 (1%)
 Frame = -3

Query: 729 MAREVSESCLDSLLTEIVSSYCNVLYATKPELAARRIEAIGYHVGHQLSERYTMERPRFN 550
           M REVSESC++SLLTE+VSSYC   YA KP+LAARRIEAIGY VGHQLSERYTMERPRF+
Sbjct: 1   MGREVSESCVESLLTEMVSSYCTRFYADKPDLAARRIEAIGYQVGHQLSERYTMERPRFS 60

Query: 549 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDDKFAWLSRMSGDPSIEISG---X 379
           DHLEAIKFICKDFWSELFKKQIDNLKTNH+GTFVLQD+KF WLSRMS DPS E +G    
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRMSVDPSPENTGSAQD 120

Query: 378 XXXXXXXXXXATGMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK 220
                     AT MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFV+RIK
Sbjct: 121 PSTDENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK 173


>ref|XP_004135644.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Cucumis sativus]
          Length = 171

 Score =  276 bits (706), Expect = 4e-72
 Identities = 135/170 (79%), Positives = 145/170 (85%)
 Frame = -3

Query: 729 MAREVSESCLDSLLTEIVSSYCNVLYATKPELAARRIEAIGYHVGHQLSERYTMERPRFN 550
           M REV+ESC+DSLLTE+VS+YC+  YA KPELAARRIEAIGY VGHQLSERYTMERPRF 
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFT 60

Query: 549 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDDKFAWLSRMSGDPSIEISGXXXX 370
           DHLEAIKFICKDFWSELFKKQIDNLKTNH+GTFVLQD++F WL+RMS DP  E       
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSAD 120

Query: 369 XXXXXXXATGMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK 220
                  AT MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFV+RIK
Sbjct: 121 GENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK 170


>gb|AEC10988.1| trafficking protein [Camellia sinensis]
          Length = 175

 Score =  275 bits (702), Expect = 1e-71
 Identities = 138/174 (79%), Positives = 150/174 (86%), Gaps = 4/174 (2%)
 Frame = -3

Query: 729 MAREVSESCLDSLLTEIVSSYCNVLYATKPELAARRIEAIGYHVGHQLSERYTMERPRFN 550
           M REVSESC++SL+TEIVSSYCN LYA KPELAARRIEAIGY VGHQLSERYTM+RPRF+
Sbjct: 1   MGREVSESCVESLMTEIVSSYCNHLYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFS 60

Query: 549 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDDKFAWLSRMSGDPSIEISG---- 382
           DHLEAIKFICKDFW+ELFKKQIDNLKTNH+GTFVLQD++F WLS MS +PS + SG    
Sbjct: 61  DHLEAIKFICKDFWTELFKKQIDNLKTNHRGTFVLQDNQFNWLSHMSIEPSSQNSGSVQD 120

Query: 381 XXXXXXXXXXXATGMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK 220
                      ATGM+LYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK
Sbjct: 121 PSTMAESKAAQATGMYLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK 174


>ref|XP_002512289.1| trafficking protein particle complex subunit 6b, putative [Ricinus
           communis] gi|223548250|gb|EEF49741.1| trafficking
           protein particle complex subunit 6b, putative [Ricinus
           communis]
          Length = 175

 Score =  271 bits (692), Expect = 2e-70
 Identities = 135/174 (77%), Positives = 146/174 (83%), Gaps = 4/174 (2%)
 Frame = -3

Query: 729 MAREVSESCLDSLLTEIVSSYCNVLYATKPELAARRIEAIGYHVGHQLSERYTMERPRFN 550
           M REVSESC+DSLLTE+VSSYCN   A KPELA RRIEAIGY VGHQL+ERYTMERPRF+
Sbjct: 1   MGREVSESCIDSLLTEMVSSYCNRFDANKPELAGRRIEAIGYQVGHQLAERYTMERPRFS 60

Query: 549 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDDKFAWLSRMSGDPSIEISGXXXX 370
           DHLEAIKFICKDFWSE+FKKQIDNLKTNH+GTFVLQD+KF WL+RMS DPSIE  G    
Sbjct: 61  DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSIENIGLSQD 120

Query: 369 XXXXXXXAT----GMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVIRIK 220
                   +     MHLYFPCGIIRGALSNLGIPCAVSADIS+LPACSFV+RIK
Sbjct: 121 PSVLEESKSAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISSLPACSFVVRIK 174


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