BLASTX nr result

ID: Atractylodes22_contig00018176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018176
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272014.2| PREDICTED: transcription elongation regulato...    89   7e-16
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...    64   3e-08

>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis
           vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
           product [Vitis vinifera]
          Length = 1046

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
 Frame = -2

Query: 564 MEPPAWLPKDVQTSTSQVSGSDPPVEGKSSPPSTPT--VAHASVVGTPTIKDRDNIGTDS 391
           M  PAWLP +VQ+S SQ   +  P  G S  P TPT  +A ASV    T +      ++S
Sbjct: 1   MASPAWLPVEVQSSASQNPVTGLPAGGPSGGPPTPTGAIAPASVATIRTSEGASGTASNS 60

Query: 390 AHDSDQANHVNSHGYVASTPSFSYNIPPNANXXXXXXXXXXXXTAMINSPGSSS--FPKP 217
             +S Q   VN+  +V   PSFSY+  P+              + + ++P +S+  F  P
Sbjct: 61  IQESAQGKFVNAPPHVLPGPSFSYSGIPHVTTASGTSQQLPSGSVISSNPLASTVVFQTP 120

Query: 216 LVPGVSTSSGPSFSYNIPQAEIAFSGGQSFHSRMASASTQSEVPKNVTLSATSLQPPVPG 37
            VPG S+SSGPSFSYNI      F G Q F S  + AS     P+  T +A S       
Sbjct: 121 -VPGPSSSSGPSFSYNIAHKGAGFPGSQPFQSSTSIASG----PRGPTPNAASFSFNGNP 175

Query: 36  QLVHPSPFLR 7
           QLV     L+
Sbjct: 176 QLVQKDQTLK 185


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 56/195 (28%), Positives = 80/195 (41%), Gaps = 22/195 (11%)
 Frame = -2

Query: 564 MEPPAWLPKDVQTSTSQVSGSDPPVEGKSSPPSTPTVAHASVVGTPTIKDR--------D 409
           M  PAWLP++          S PPV G++  P   +       G PT   R        +
Sbjct: 1   MASPAWLPQE----------SQPPVSGETPLPMASSAHTTPSTGKPTAPLRFLYDFNSSN 50

Query: 408 NIGTDSAHDSDQANHVNSHGYVASTPS--FSYNIPPNANXXXXXXXXXXXXTAMINSPGS 235
            I T+S   +  A   N+  +VA  P+  F+Y +  N N                NS  +
Sbjct: 51  VIPTESVKVTAHAKLFNATAFVAPAPAPPFAYGMLQNVNASGSSQQSSTHPGMKSNSAVN 110

Query: 234 SSFPKPLVPGVSTSSGPSFSYNIPQAEIAFSGGQ-----------SFHSRMASASTQSEV 88
               +P  PGVS  + PSFSYNIPQ+   FS  Q           S    +   S+ S +
Sbjct: 111 PMVVQP--PGVSLHAAPSFSYNIPQSGAIFSSNQQHAQSSTNMPDSVAQDVGKLSSASSI 168

Query: 87  PKNVTL-SATSLQPP 46
           P +V   ++TS+ PP
Sbjct: 169 PHSVPAHTSTSIMPP 183