BLASTX nr result

ID: Atractylodes22_contig00018064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018064
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5MYA4.3|H32_CICIN RecName: Full=Histone H3.2 gi|40217937|gb|...   128   6e-28
ref|XP_003972625.1| PREDICTED: histone H3.2-like [Takifugu rubri...   127   9e-28
ref|XP_003384122.1| PREDICTED: histone H3-like [Amphimedon queen...   126   2e-27
ref|NP_001183546.1| uncharacterized LOC100502113 [Zea mays] gi|1...   126   2e-27
gb|AAY90124.1| histone 3 [Rheum australe]                             125   3e-27

>sp|Q5MYA4.3|H32_CICIN RecName: Full=Histone H3.2 gi|40217937|gb|AAR82893.1| histone H3
           protein [Cichorium intybus]
          Length = 136

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +3

Query: 3   IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 182
           IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 63  IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 122

Query: 183 KDMQL 197
           KDMQL
Sbjct: 123 KDMQL 127


>ref|XP_003972625.1| PREDICTED: histone H3.2-like [Takifugu rubripes]
          Length = 154

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/84 (78%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 182
           IRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 63  IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 122

Query: 183 KDMQLXXXXXXXXXXXXXFSLFPH 254
           KD+QL              S+ PH
Sbjct: 123 KDIQLARRIQGLQEGPLGVSILPH 146


>ref|XP_003384122.1| PREDICTED: histone H3-like [Amphimedon queenslandica]
           gi|340371209|ref|XP_003384138.1| PREDICTED: histone
           H3-like [Amphimedon queenslandica]
          Length = 136

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = +3

Query: 3   IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 182
           IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 63  IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 122

Query: 183 KDMQL 197
           KD+QL
Sbjct: 123 KDIQL 127


>ref|NP_001183546.1| uncharacterized LOC100502113 [Zea mays] gi|195642010|gb|ACG40473.1|
           histone H3 [Zea mays] gi|238012878|gb|ACR37474.1|
           unknown [Zea mays] gi|238012886|gb|ACR37478.1| unknown
           [Zea mays] gi|238013010|gb|ACR37540.1| unknown [Zea
           mays] gi|238014158|gb|ACR38114.1| unknown [Zea mays]
           gi|414879551|tpg|DAA56682.1| TPA: histone H3 [Zea mays]
          Length = 136

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = +3

Query: 3   IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 182
           IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 63  IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 122

Query: 183 KDMQL 197
           KD+QL
Sbjct: 123 KDIQL 127


>gb|AAY90124.1| histone 3 [Rheum australe]
          Length = 136

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/65 (96%), Positives = 65/65 (100%)
 Frame = +3

Query: 3   IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 182
           IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEA+E+YLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 63  IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAESYLVGLFEDTNLCAIHAKRVTIMP 122

Query: 183 KDMQL 197
           KDMQL
Sbjct: 123 KDMQL 127


Top