BLASTX nr result

ID: Atractylodes22_contig00018051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018051
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   120   1e-25
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...   120   1e-25
ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsi...   120   1e-25
dbj|BAD67606.1| putative splicing factor Prp8 [Oryza sativa Japo...   120   1e-25
gb|AFW85665.1| hypothetical protein ZEAMMB73_106179 [Zea mays]        120   1e-25

>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = -1

Query: 196  VIHTSVWAGQKCLVQLAKWKTTEEVAALVRSLPVEEQPKQIIVTCKGMLDPLEVHLLDFP 17
            VIHTSVWAGQK L QLAKWKT EEVAALVRSLPVEEQPKQIIVT KGMLDPLEVHLLDFP
Sbjct: 1833 VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1892

Query: 16   NIVIK 2
            NIVIK
Sbjct: 1893 NIVIK 1897


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
            sativus]
          Length = 2347

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = -1

Query: 196  VIHTSVWAGQKCLVQLAKWKTTEEVAALVRSLPVEEQPKQIIVTCKGMLDPLEVHLLDFP 17
            VIHTSVWAGQK L QLAKWKT EEVAALVRSLPVEEQPKQIIVT KGMLDPLEVHLLDFP
Sbjct: 1833 VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1892

Query: 16   NIVIK 2
            NIVIK
Sbjct: 1893 NIVIK 1897


>ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing
            factor Prp8 [Arabidopsis thaliana]
            gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2359

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = -1

Query: 196  VIHTSVWAGQKCLVQLAKWKTTEEVAALVRSLPVEEQPKQIIVTCKGMLDPLEVHLLDFP 17
            VIHTSVWAGQK L QLAKWKT EEVAALVRSLPVEEQPKQIIVT KGMLDPLEVHLLDFP
Sbjct: 1845 VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1904

Query: 16   NIVIK 2
            NIVIK
Sbjct: 1905 NIVIK 1909


>dbj|BAD67606.1| putative splicing factor Prp8 [Oryza sativa Japonica Group]
          Length = 2350

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = -1

Query: 196  VIHTSVWAGQKCLVQLAKWKTTEEVAALVRSLPVEEQPKQIIVTCKGMLDPLEVHLLDFP 17
            VIHTSVWAGQK L QLAKWKT EEVAALVRSLPVEEQPKQIIVT KGMLDPLEVHLLDFP
Sbjct: 1836 VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1895

Query: 16   NIVIK 2
            NIVIK
Sbjct: 1896 NIVIK 1900


>gb|AFW85665.1| hypothetical protein ZEAMMB73_106179 [Zea mays]
          Length = 2363

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = -1

Query: 196  VIHTSVWAGQKCLVQLAKWKTTEEVAALVRSLPVEEQPKQIIVTCKGMLDPLEVHLLDFP 17
            VIHTSVWAGQK L QLAKWKT EEVAALVRSLPVEEQPKQIIVT KGMLDPLEVHLLDFP
Sbjct: 1849 VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1908

Query: 16   NIVIK 2
            NIVIK
Sbjct: 1909 NIVIK 1913


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