BLASTX nr result

ID: Atractylodes22_contig00018028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018028
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566432.1| PREDICTED: topless-related protein 2-like is...    62   5e-08
ref|XP_003566431.1| PREDICTED: topless-related protein 2-like is...    62   5e-08
dbj|BAJ96033.1| predicted protein [Hordeum vulgare subsp. vulgar...    60   2e-07
dbj|BAJ85297.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
ref|XP_002330180.1| predicted protein [Populus trichocarpa] gi|2...    52   3e-07

>ref|XP_003566432.1| PREDICTED: topless-related protein 2-like isoform 2 [Brachypodium
           distachyon]
          Length = 1125

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 203 LTVGSANGVITLWDVGL*EKLTSKLFKIWDMSACSWLFRSAL 78
           L VGSANG ITLW++GL E+L SK FKIWDM ACS  F+SA+
Sbjct: 355 LLVGSANGEITLWEIGLRERLVSKPFKIWDMQACSTQFQSAV 396


>ref|XP_003566431.1| PREDICTED: topless-related protein 2-like isoform 1 [Brachypodium
           distachyon]
          Length = 1132

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 203 LTVGSANGVITLWDVGL*EKLTSKLFKIWDMSACSWLFRSAL 78
           L VGSANG ITLW++GL E+L SK FKIWDM ACS  F+SA+
Sbjct: 355 LLVGSANGEITLWEIGLRERLVSKPFKIWDMQACSTQFQSAV 396


>dbj|BAJ96033.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326513014|dbj|BAK03414.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 1130

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -2

Query: 203 LTVGSANGVITLWDVGL*EKLTSKLFKIWDMSACSWLFRSAL 78
           L VGSANG  TLW++GL E+L SK FKIWDM ACS  F+S L
Sbjct: 353 LLVGSANGEFTLWEIGLRERLVSKPFKIWDMQACSAQFQSVL 394


>dbj|BAJ85297.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1130

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -2

Query: 203 LTVGSANGVITLWDVGL*EKLTSKLFKIWDMSACSWLFRSAL 78
           L VGSANG  TLW++GL E+L SK FKIWDM ACS  F+S L
Sbjct: 353 LLVGSANGEFTLWEIGLRERLVSKPFKIWDMQACSAQFQSVL 394


>ref|XP_002330180.1| predicted protein [Populus trichocarpa] gi|222871636|gb|EEF08767.1|
           predicted protein [Populus trichocarpa]
          Length = 1133

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -2

Query: 203 LTVGSANGVITLWDVGL*EKLTSKLFKIWDMSACSWLFRSA 81
           L VGS NG ITLW++   E+L SK FKIWDMSACS  F+++
Sbjct: 362 LLVGSVNGEITLWELISRERLFSKPFKIWDMSACSLQFQAS 402



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 358 TMDFHPSYQTLLLSTSV 308
           +MDFHPS+ TLLL  SV
Sbjct: 351 SMDFHPSHHTLLLVGSV 367


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