BLASTX nr result

ID: Atractylodes22_contig00017992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017992
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002862511.1| predicted protein [Arabidopsis lyrata subsp....    58   7e-07
ref|XP_002865558.1| hypothetical protein ARALYDRAFT_917583 [Arab...    58   9e-07
ref|NP_199036.2| major facilitator protein [Arabidopsis thaliana...    57   2e-06
ref|XP_004167746.1| PREDICTED: hippocampus abundant transcript 1...    57   2e-06
ref|XP_004144923.1| PREDICTED: tetracycline resistance protein, ...    57   2e-06

>ref|XP_002862511.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308076|gb|EFH38769.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 238

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
 Frame = +1

Query: 91  YYLKAEFHFDKDQFADLMIINGIAGIISQ-----VYIPHLSHD--YNINYF*GSNFYIYI 249
           YYLKA+FHF+KDQFADLMII+G  G ISQ     + +P L  +   +I  F G   ++++
Sbjct: 68  YYLKAKFHFNKDQFADLMIISGATGSISQLLFMPILVPALKEERLLSIGLFFG-GAHMFL 126

Query: 250 YCICFGDWI 276
            C+ +  W+
Sbjct: 127 ICVAWSSWV 135


>ref|XP_002865558.1| hypothetical protein ARALYDRAFT_917583 [Arabidopsis lyrata subsp.
           lyrata] gi|297311393|gb|EFH41817.1| hypothetical protein
           ARALYDRAFT_917583 [Arabidopsis lyrata subsp. lyrata]
          Length = 282

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
 Frame = +1

Query: 91  YYLKAEFHFDKDQFADLMIINGIAGIISQ-----VYIPHLSHD--YNINYF*GSNFYIYI 249
           YYLKA+FHF+KDQFADLMII G AG ISQ     + +P L  +   +I  F G   ++++
Sbjct: 112 YYLKAKFHFNKDQFADLMIIFGAAGSISQLLFMPILVPALKEERLLSIGLFFGC-AHMFL 170

Query: 250 YCICFGDWI 276
            C+ +  W+
Sbjct: 171 ICVAWSSWV 179


>ref|NP_199036.2| major facilitator protein [Arabidopsis thaliana]
           gi|332007397|gb|AED94780.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 282

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
 Frame = +1

Query: 91  YYLKAEFHFDKDQFADLMIINGIAGIISQ-----VYIPHLSHD--YNINYF*GSNFYIYI 249
           YYLKA+FHF+KDQFADLMII G +G ISQ     V +P L  +   +I  F G   ++++
Sbjct: 112 YYLKAKFHFNKDQFADLMIIVGASGSISQLLFMPVLVPALKEERLLSIGLFFGC-AHMFL 170

Query: 250 YCICFGDWI 276
            C+ +  W+
Sbjct: 171 LCVAWSSWV 179


>ref|XP_004167746.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis
           sativus]
          Length = 434

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 5/43 (11%)
 Frame = +1

Query: 91  YYLKAEFHFDKDQFADLMIINGIAGIISQ-----VYIPHLSHD 204
           YY KA FHFDKDQFADLM++NG+AG +SQ     + +P LS D
Sbjct: 271 YYFKARFHFDKDQFADLMLLNGVAGTVSQLVLMPLLVPVLSED 313


>ref|XP_004144923.1| PREDICTED: tetracycline resistance protein, class D-like [Cucumis
           sativus]
          Length = 448

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 5/43 (11%)
 Frame = +1

Query: 91  YYLKAEFHFDKDQFADLMIINGIAGIISQ-----VYIPHLSHD 204
           YY KA FHFDKDQFADLM++NG+AG +SQ     + +P LS D
Sbjct: 271 YYFKARFHFDKDQFADLMLLNGVAGTVSQLVLMPLLVPVLSED 313


Top