BLASTX nr result

ID: Atractylodes22_contig00017990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017990
         (2298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   387   e-105
emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]   376   e-101
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   357   8e-96
ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu...   342   3e-91
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   342   3e-91

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  387 bits (993), Expect = e-105
 Identities = 210/387 (54%), Positives = 260/387 (67%), Gaps = 12/387 (3%)
 Frame = -3

Query: 2296 IIKRFRDSIKENPPSKENPMPKITFTEARKSIIGDVGSVRKVFDFLEAWGLINYFGSPMT 2117
            + K +R+SI  +   ++NP  K+TFT+ RK ++GDVGS+R+VFDFLEAWGLINY GS + 
Sbjct: 95   VYKYYRNSIILS--FRQNPSRKLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSAL- 151

Query: 2116 KAQLKWEDKESKNVSAASHQNSDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDT 1937
            K  LKWE+K++K+  A+SH     GGA      S+PK+++CS C SLC+IACF+  K D 
Sbjct: 152  KQPLKWEEKDNKSGGASSHTGDAGGGAVE----SIPKRRWCSGCKSLCSIACFACDKFDL 207

Query: 1936 TFCARCYVRA----GVNSADFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHV 1769
            T CARCYVR     GVNS+DF+RVEISE+ K  WT+KETLHLLEAV HY DDWKKV+EHV
Sbjct: 208  TLCARCYVRGNYRVGVNSSDFRRVEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHV 267

Query: 1768 VGRSEKECVDRFIKLPFGEQFLGPPDSAEPEENFHKATNQLDT--------ESPPSKKMR 1613
             GR+EKECV  FIKL FGEQ+LG   S + +  F +A +Q D          S  SKKMR
Sbjct: 268  GGRNEKECVTHFIKLSFGEQYLGHTSSGDVDNKFSQAKDQSDAGFGQENIGTSSASKKMR 327

Query: 1612 PTPFDDASNPILAQAAFLSKLXXXXXXXXXXXXXXXXXXXVNNETSKEILESSAGDARHH 1433
             TP  DASNPI+AQAAFLS L                   V+    KE L S A  AR  
Sbjct: 328  LTPLSDASNPIMAQAAFLSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQ 387

Query: 1432 GDSVTTNGKSNTNSWEGAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELEL 1253
              +V +NG + +N  EGAY++A   L++EE D+ER IS I EVQ K+I DKIV FEE EL
Sbjct: 388  DPNVESNGNTTSNVLEGAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFEL 447

Query: 1252 QMEREWQQLRQMQNLLFADQLTLLFHK 1172
             ME+EWQQL+QM+NLLF DQLTLLF K
Sbjct: 448  HMEKEWQQLQQMKNLLFVDQLTLLFQK 474


>emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]
          Length = 422

 Score =  376 bits (965), Expect = e-101
 Identities = 203/372 (54%), Positives = 250/372 (67%), Gaps = 12/372 (3%)
 Frame = -3

Query: 2251 KENPMPKITFTEARKSIIGDVGSVRKVFDFLEAWGLINYFGSPMTKAQLKWEDKESKNVS 2072
            ++NP  K+TFT+ RK ++GDVGS+R+VFDFLEAWGLINY GS + K  LKWE+K++K+  
Sbjct: 38   RQNPSRKLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSAL-KQPLKWEEKDNKSGG 96

Query: 2071 AASHQNSDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDTTFCARCYVRA----G 1904
            A+S      GGA      S+PK+++CS C SLC+IACF+  K D T CARCYVR     G
Sbjct: 97   ASSXTGDAGGGAVE----SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVG 152

Query: 1903 VNSADFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKL 1724
            VNS+DF+RVEISE+ K  WT+KETLHLLEAV HY DDWKKV+EHV GR+EKECV  FIKL
Sbjct: 153  VNSSDFRRVEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKL 212

Query: 1723 PFGEQFLGPPDSAEPEENFHKATNQLDT--------ESPPSKKMRPTPFDDASNPILAQA 1568
             FGEQ+LG   S + +  F +A +Q D          S  SKKMR TP  DASNPI+AQA
Sbjct: 213  SFGEQYLGHTSSGDVDNKFSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQA 272

Query: 1567 AFLSKLXXXXXXXXXXXXXXXXXXXVNNETSKEILESSAGDARHHGDSVTTNGKSNTNSW 1388
            AFLS L                   V+    KE L S A  AR    +V +NG + +N+ 
Sbjct: 273  AFLSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVESNGDTTSNAL 332

Query: 1387 EGAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNL 1208
            EGAY++A   L++EE D+ER IS I EVQ K+I DKIV FEE EL ME+E QQL+QM+ L
Sbjct: 333  EGAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEXQQLQQMKXL 392

Query: 1207 LFADQLTLLFHK 1172
            LF DQLTLLF K
Sbjct: 393  LFVDQLTLLFQK 404


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  357 bits (916), Expect = 8e-96
 Identities = 202/390 (51%), Positives = 255/390 (65%), Gaps = 18/390 (4%)
 Frame = -3

Query: 2296 IIKRFRDSIKENPPSKENPMPKITFTEARKSIIGDVGSVRKVFDFLEAWGLINYFGSPMT 2117
            + K +R+SI      ++NP  K+TFTE RK+++GDVGS+R+VFDFL+AWGLINY  SP+ 
Sbjct: 87   VYKYYRNSIISQ--FRKNPSAKLTFTEIRKTLVGDVGSIRRVFDFLDAWGLINY--SPLN 142

Query: 2116 KAQLKWED-KESKNVSAASHQNSDPGGANSVGDASVPK-----KKFCSSCNSLCTIACFS 1955
            K QLKWED K+S + +AAS      G   + GDA+        K+ CS C SLC+IACF 
Sbjct: 143  K-QLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNTKDNCKRLCSGCKSLCSIACFF 201

Query: 1954 NIKKDTTFCARCYVRA----GVNSADFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWK 1787
              K D T CARCYVR     GV+S+DF+RVEISEE +TDWTEKETL LLEAV HYRDDWK
Sbjct: 202  CDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTDWTEKETLQLLEAVMHYRDDWK 261

Query: 1786 KVSEHVVGRSEKECVDRFIKLPFGEQFLGPPDSAEPEENFHKATNQLDTES--------P 1631
            KV++HV GRSEK+C+  FIKLPFGE F    D  + +  +++  +  D ES         
Sbjct: 262  KVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDSKYNQIKDCDDDESGRNGNGSPS 321

Query: 1630 PSKKMRPTPFDDASNPILAQAAFLSKLXXXXXXXXXXXXXXXXXXXVNNETSKEILESSA 1451
             SKK+R +P  DASNPI+AQAAFLS L                   V    SK  LE  +
Sbjct: 322  TSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARAAVTTLTEVEYGGSKGSLEFVS 381

Query: 1450 GDARHHGDSVTTNGKSNTNSWEGAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVR 1271
               +H    V +NG +N ++   A L+AN  L+KEE D+ER IS I EVQ K+I DKI+R
Sbjct: 382  RVTKHLDSGVASNGDTNLSASVKACLDANSLLEKEESDVERAISRITEVQMKEIQDKILR 441

Query: 1270 FEELELQMEREWQQLRQMQNLLFADQLTLL 1181
            FEEL+LQME+EWQQL QM+NLLFADQL++L
Sbjct: 442  FEELDLQMEKEWQQLDQMKNLLFADQLSVL 471


>ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis]
            gi|223531538|gb|EEF33368.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 482

 Score =  342 bits (877), Expect = 3e-91
 Identities = 192/400 (48%), Positives = 243/400 (60%), Gaps = 8/400 (2%)
 Frame = -3

Query: 2296 IIKRFRDSIKENPPSKENPMPKITFTEARKSIIGDVGSVRKVFDFLEAWGLINYFGSPMT 2117
            IIK FR +         NP  KITFTE RK+++GDVGS+R+VFDFLEAWGLINYF S ++
Sbjct: 108  IIKCFRQN---------NPSVKITFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALS 158

Query: 2116 KAQLKWEDKESKNVSAASHQNSDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDT 1937
            K  LKWEDK++K+ ++A  + +         DA+   K+ CS C S+C+IACF   K D 
Sbjct: 159  KP-LKWEDKDAKSSASADVKGNSADSTPPKRDAT---KRLCSGCQSVCSIACFVCDKFDL 214

Query: 1936 TFCARCYVRAGVNSADFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRS 1757
            T CARCYVR          + + EE++++WTEKETL LLEAV H+ DDWKKV+ HV GRS
Sbjct: 215  TLCARCYVRG--------TIALVEEIRSEWTEKETLQLLEAVTHFGDDWKKVALHVPGRS 266

Query: 1756 EKECVDRFIKLPFGEQFLGPPDSAEPEENFHKATNQLDT--------ESPPSKKMRPTPF 1601
            E++CV  FIKLPFGEQF G  D  E  + + +  +  D          S  SKKMR TP 
Sbjct: 267  ERDCVSHFIKLPFGEQFAGYTDLGELNDKYDQVKDSSDAVCGSESIDSSSSSKKMRLTPL 326

Query: 1600 DDASNPILAQAAFLSKLXXXXXXXXXXXXXXXXXXXVNNETSKEILESSAGDARHHGDSV 1421
             DASNPI+ QAAFLS L                     +E SK  L S +   R  G   
Sbjct: 327  ADASNPIMGQAAFLSALAGTEVAEAAARAAVTAL----SEPSKSSLGSFSRSTREQGAID 382

Query: 1420 TTNGKSNTNSWEGAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMER 1241
             +NG +  N  E   L+AN  L+KEE D ER IS + EVQ K+I DKI+RFE+L+L ME+
Sbjct: 383  ASNGNAEQNGCERTSLDANSLLEKEELDAERAISRLVEVQLKEIQDKIIRFEKLDLLMEK 442

Query: 1240 EWQQLRQMQNLLFADQLTLLFHKNDGTSRNGSMEQKVKTE 1121
            EWQQL Q++NLLF DQLTLLFHK         +E+ V+TE
Sbjct: 443  EWQQLEQVKNLLFVDQLTLLFHKKSAPKTEEHVEENVRTE 482


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  342 bits (876), Expect = 3e-91
 Identities = 197/409 (48%), Positives = 255/409 (62%), Gaps = 18/409 (4%)
 Frame = -3

Query: 2296 IIKRFRDSIKENPPSKENPMPKITFTEARKSIIGDVGSVRKVFDFLEAWGLINYFGSPMT 2117
            + K +R+SI +    + NP  KITFT+ RK+++GDVGS+R+VFDFLE WGLINY  S   
Sbjct: 88   VYKYYRNSIVKY--FRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLINYHPSSSL 145

Query: 2116 KAQLKWEDKESKNVSAASHQNSDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDT 1937
               LKW+DKE+K+ SA++   S      S   A    K+ CS C  +CTIACF+  K D 
Sbjct: 146  TKPLKWDDKETKSDSASNTTES------SSAPAKENTKRLCSGCKVVCTIACFACDKYDL 199

Query: 1936 TFCARCYVRA----GVNSADFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHV 1769
            T CARCYVR     GVNS+DF+RVEISEE KTDW EKET +LLEA+ HY DDWK+VS+HV
Sbjct: 200  TLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVSQHV 259

Query: 1768 VGRSEKECVDRFIKLPFGEQFL---------GPPDSAEPEENFHK--ATNQLDT--ESPP 1628
             GR+EKECV  F+KLPF +QF          G  DS  P +      A ++LDT   + P
Sbjct: 260  PGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELDTVASAEP 319

Query: 1627 SKKMRPTPFDDASNPILAQAAFLSKLXXXXXXXXXXXXXXXXXXXVNNETSKEILESSAG 1448
            +K+MR TP  DASNPI+AQAAFLS L                   V   T K    S   
Sbjct: 320  NKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKAT-KINYRSFPR 378

Query: 1447 DARHHGDSVTTNGKSNTNSWEGAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRF 1268
            +       + +NG + ++S++G+ L AN+QL+KEE D+E+ IS+I EVQ K+I DK+V+F
Sbjct: 379  NTLLQDAGIMSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQF 438

Query: 1267 EELELQMEREWQQLRQMQNLLFADQLTLLFHKNDGTSRNGSME-QKVKT 1124
            E+L+L ME+E QQL QM+N+ F DQLTLLFHK+         E   VKT
Sbjct: 439  EDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHKSSAPKTGECQEGNNVKT 487


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