BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017989
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           233   9e-60
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   233   1e-59
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   231   4e-59
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   230   8e-59
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     228   3e-58

>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  233 bits (595), Expect = 9e-60
 Identities = 113/142 (79%), Positives = 122/142 (85%)
 Frame = -1

Query: 428  LAPSXXXXXXXXXXXXLDKGFIRPSSSPWGAPILFVRKKDGTMRMCIDYRELNKVTIKNK 249
            +APS            LDKGFIRPS SPWGAP+LFVRKKDG++RMCIDYR+LNKVTIKNK
Sbjct: 751  MAPSELKELKEQLKDLLDKGFIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNK 810

Query: 248  YPLPRIDDLFDQLQGASFFSKIDLRSGYHQFKVSEADIPKTAFRTRYGHYEFLVMPFGLT 69
            YPLPRIDDLF+QLQGA+ FSKIDLRSGYHQ +V E DIPKTAFRTRYGHYEFLVM FGLT
Sbjct: 811  YPLPRIDDLFNQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLT 870

Query: 68   NAPAAFMDLMNRVCRPYLDKFV 3
            NAPAAFMDLMNRV +PYLD FV
Sbjct: 871  NAPAAFMDLMNRVFKPYLDTFV 892


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  233 bits (594), Expect = 1e-59
 Identities = 110/125 (88%), Positives = 117/125 (93%)
 Frame = -1

Query: 377  DKGFIRPSSSPWGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGAS 198
            +KGFIRPS SPWGAP+LFVRKKDG++RMCIDYR+LNKVTIKNKYPLPRIDDLFDQLQGA+
Sbjct: 683  EKGFIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGAT 742

Query: 197  FFSKIDLRSGYHQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVCRPY 18
             FSKIDLRSGYHQ +V E DIPKTAFRTRYGHYEFLVM FGLTNAPAAFMDLMNRV RPY
Sbjct: 743  CFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPY 802

Query: 17   LDKFV 3
            LD FV
Sbjct: 803  LDMFV 807


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  231 bits (590), Expect = 4e-59
 Identities = 109/125 (87%), Positives = 117/125 (93%)
 Frame = -1

Query: 377  DKGFIRPSSSPWGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGAS 198
            +KGFIRPS SPWGAP+LFVRKKDG++R+CIDYR+LNKVTIKNKYPLPRIDDLFDQLQGA+
Sbjct: 689  EKGFIRPSVSPWGAPVLFVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGAT 748

Query: 197  FFSKIDLRSGYHQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVCRPY 18
             FSKIDLRSGYHQ +V E DIPKTAFRTRYGHYEFLVM FGLTNAPAAFMDLMNRV RPY
Sbjct: 749  CFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPY 808

Query: 17   LDKFV 3
            LD FV
Sbjct: 809  LDMFV 813


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  230 bits (587), Expect = 8e-59
 Identities = 107/142 (75%), Positives = 120/142 (84%)
 Frame = -1

Query: 428  LAPSXXXXXXXXXXXXLDKGFIRPSSSPWGAPILFVRKKDGTMRMCIDYRELNKVTIKNK 249
            +AP+            LDKG+IRPS SPWGAP+LFV+KKDG++R+CIDYRELN VT+KNK
Sbjct: 600  MAPAEMNELKNQLEELLDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNK 659

Query: 248  YPLPRIDDLFDQLQGASFFSKIDLRSGYHQFKVSEADIPKTAFRTRYGHYEFLVMPFGLT 69
            YPLPRIDDLFDQLQGA  FSKIDLRSGYHQ ++ + DIPKTAFRTRYGHYEF VMPFGLT
Sbjct: 660  YPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGHYEFTVMPFGLT 719

Query: 68   NAPAAFMDLMNRVCRPYLDKFV 3
            NAPA FMDLMNR+ RPYLDKFV
Sbjct: 720  NAPAVFMDLMNRIFRPYLDKFV 741


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  228 bits (582), Expect = 3e-58
 Identities = 106/124 (85%), Positives = 115/124 (92%)
 Frame = -1

Query: 374  KGFIRPSSSPWGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASF 195
            KGFIRPS SPWGAP+LFV+KKDGTMRMCIDYR+LNKVT+KN+YP+PRIDDLFDQLQGA+ 
Sbjct: 876  KGFIRPSVSPWGAPVLFVKKKDGTMRMCIDYRQLNKVTVKNRYPMPRIDDLFDQLQGAAV 935

Query: 194  FSKIDLRSGYHQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVCRPYL 15
            FSKIDLRSGYHQ ++  ADIPKTAFRTRYGHYEFLVM FGLTNAPAAFMDLM RV RPYL
Sbjct: 936  FSKIDLRSGYHQLRIRAADIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMTRVFRPYL 995

Query: 14   DKFV 3
            D FV
Sbjct: 996  DLFV 999