BLASTX nr result

ID: Atractylodes22_contig00017953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017953
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   104   7e-21
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    99   5e-19
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    75   4e-12
ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219...    75   7e-12
ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232...    73   3e-11

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3   RARVTLKNMWKTIAKEGGGYLIQLNQV---EGQPXXXXXXXXXXVFHPILHRFRQVFNMP 173
           R  V+LK M++T+ KEGGG+L+ LNQ+   EG P             P+L  ++QVFNMP
Sbjct: 545 RTEVSLKAMYRTLRKEGGGFLVDLNQMASHEGLPRELPEVPSC--LQPLLSSYQQVFNMP 602

Query: 174 SGLPPHRSIEHAILLKEGTNPVNVRPYRYPQVQKDEIERM 293
            GLPP R   HAI L+ GTNPV+VRPYRYPQ QKDEIE++
Sbjct: 603 LGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQL 642


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/102 (50%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   RARVTLKNMWKTIAKEGGGYLIQLNQVEGQPXXXXXXXXXXVFHP-----ILHRFRQVFN 167
           R++V+LK M +T+ KEGGG  ++ NQVE                P     ++ RF  VF 
Sbjct: 609 RSKVSLKAMLRTLRKEGGGLWLECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFE 668

Query: 168 MPSGLPPHRSIEHAILLKEGTNPVNVRPYRYPQVQKDEIERM 293
            P GLPP R  EHAI+LKEG+NPV VRPYRYPQ QKDEIER+
Sbjct: 669 TPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERL 710


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3    RARVTLKNMWKTIAKEGGGYLIQLNQVEGQPXXXXXXXXXXVF------HPILHRFRQVF 164
            +A V LKNM K+      G+LI+   +E             V         +L +F  VF
Sbjct: 1455 KAMVGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSDVLKKFEDVF 1514

Query: 165  NMPSGLPPHRSIEHAILLKEGTNPVNVRPYRYPQVQKDEIERM 293
              P  LPP RSIEH I LK+GT+PVNVRPYRY   QK E+ER+
Sbjct: 1515 TWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL 1557


>ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
          Length = 718

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3   RARVTLKNMWKTIAKEGGGYLIQLNQVEGQPXXXXXXXXXXVF------HPILHRFRQVF 164
           +A V LKNM K+      G+LI+   +E             +         +L +F  VF
Sbjct: 515 KAMVGLKNMIKSWKDSDQGFLIECRAMETMYEPSEDNGIEEILTVDEAVSVVLKKFEDVF 574

Query: 165 NMPSGLPPHRSIEHAILLKEGTNPVNVRPYRYPQVQKDEIERM 293
             P  LPP RSIEH I LK+GT+PVNVRPYRY   QK E+ER+
Sbjct: 575 TWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL 617


>ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
           sativus]
          Length = 497

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3   RARVTLKNMWKTIAKEGGGYLIQLN------QVEGQPXXXXXXXXXXVFHPILHRFRQVF 164
           +ARV+LK + K+   +  G+L++         +EG                +L  F  VF
Sbjct: 186 KARVSLKTLMKSWGDKDQGFLVECRALERRESLEGDDSFGEVLTVEESVAVVLKSFEDVF 245

Query: 165 NMPSGLPPHRSIEHAILLKEGTNPVNVRPYRYPQVQKDEIERM 293
             P  LPP R IEH I LK+GT+PVNVRPYRY   +K E+ER+
Sbjct: 246 EWPETLPPRRVIEHQIHLKKGTDPVNVRPYRYAYQEKTEMERL 288


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