BLASTX nr result

ID: Atractylodes22_contig00017933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017933
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
emb|CBI27822.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   104   1e-20
emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]   104   1e-20
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   103   1e-20

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  106 bits (264), Expect = 3e-21
 Identities = 48/67 (71%), Positives = 58/67 (86%)
 Frame = -2

Query: 562 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 383
           LRGI+ME+EY P+SS +KS ++M EF DIWQEA+SKRSLPGHF+HMEPNF E+GLS  Y+
Sbjct: 136 LRGIIMEVEYLPLSSIDKSRQVMEEFVDIWQEAISKRSLPGHFMHMEPNFVEYGLSDHYS 195

Query: 382 LQHTAVQ 362
            QHTAVQ
Sbjct: 196 SQHTAVQ 202


>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 383
           LRGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT
Sbjct: 137 LRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYT 196

Query: 382 LQHTAVQ 362
            QHTAVQ
Sbjct: 197 SQHTAVQ 203


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 383
           LRGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT
Sbjct: 136 LRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYT 195

Query: 382 LQHTAVQ 362
            QHTAVQ
Sbjct: 196 SQHTAVQ 202


>emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]
          Length = 242

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 383
           LRGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT
Sbjct: 156 LRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYT 215

Query: 382 LQHTAVQ 362
            QHTAVQ
Sbjct: 216 SQHTAVQ 222


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 383
           LRGIVME+EY PISS EKS ++M EFFD+WQEA+SK SLPG F+H+E NF E+GLS  YT
Sbjct: 137 LRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFMHIESNFAEYGLSDYYT 196

Query: 382 LQHTAVQ 362
            QHTAVQ
Sbjct: 197 SQHTAVQ 203


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