BLASTX nr result

ID: Atractylodes22_contig00017843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017843
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   115   5e-24
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24

>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
            predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/85 (67%), Positives = 65/85 (76%)
 Frame = -1

Query: 255  LQDMGLKISKNSIVLMLDAFAQAGNVFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKH 76
            LQD+G KISK+SI+LMLDAFA+AGN+FEVKKIYHGMKAAGYFP+MHLYR+M  LLCR K 
Sbjct: 876  LQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQ 935

Query: 75   XXXXXXXXXXXXXVGFRPDLFIWNS 1
                          GF+PDL IWNS
Sbjct: 936  VRDVEAMLSEMEEAGFKPDLSIWNS 960


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/85 (68%), Positives = 67/85 (78%)
 Frame = -1

Query: 255  LQDMGLKISKNSIVLMLDAFAQAGNVFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKH 76
            LQDM LKISK+SI+LML+AFAQAGN+FEV+K+Y+GMKAAGYFPTMHLYRLMIGLLCR K 
Sbjct: 885  LQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKR 944

Query: 75   XXXXXXXXXXXXXVGFRPDLFIWNS 1
                          GF+PDL I+NS
Sbjct: 945  VRDVRVMLSEMGEAGFKPDLQIFNS 969


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/85 (68%), Positives = 64/85 (75%)
 Frame = -1

Query: 255  LQDMGLKISKNSIVLMLDAFAQAGNVFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKH 76
            LQDMG KISK+SI+LMLDAFA+AGN+FEVKKIYHGMKAAGYFPTMHLYR+M  LL R K 
Sbjct: 874  LQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQ 933

Query: 75   XXXXXXXXXXXXXVGFRPDLFIWNS 1
                          GF+PDL IWNS
Sbjct: 934  VRDVEAMLSEMEEAGFKPDLSIWNS 958


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/85 (67%), Positives = 62/85 (72%)
 Frame = -1

Query: 255  LQDMGLKISKNSIVLMLDAFAQAGNVFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKH 76
            LQDMG KISK+SI LMLDAFA AGN+FEVKKIY GMKAAGYFPTMHLYR+MIGLL + K 
Sbjct: 875  LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 934

Query: 75   XXXXXXXXXXXXXVGFRPDLFIWNS 1
                           F+PDL IWNS
Sbjct: 935  VRDVEAMVSEMEVAXFKPDLSIWNS 959


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/85 (67%), Positives = 62/85 (72%)
 Frame = -1

Query: 255  LQDMGLKISKNSIVLMLDAFAQAGNVFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKH 76
            LQDMG KISK+SI LMLDAFA AGN+FEVKKIY GMKAAGYFPTMHLYR+MIGLL + K 
Sbjct: 843  LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 902

Query: 75   XXXXXXXXXXXXXVGFRPDLFIWNS 1
                           F+PDL IWNS
Sbjct: 903  VRDVEAMVSEMEVARFKPDLSIWNS 927


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