BLASTX nr result

ID: Atractylodes22_contig00017747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017747
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...    61   9e-07
ref|XP_002862370.1| 26S proteasome regulatory subunit [Arabidops...    60   2e-06
ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...    58   7e-06
ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...    58   7e-06
emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera]    57   9e-06

>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -2

Query: 189 KVALDIDYHHNMLSSHLKVNPKEVIVGWKSYRNG 88
           +VALDIDYHHNMLSSH KVNPKEVIVGW S   G
Sbjct: 74  QVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTG 107


>ref|XP_002862370.1| 26S proteasome regulatory subunit [Arabidopsis lyrata subsp.
           lyrata] gi|297827613|ref|XP_002881689.1| 26S proteasome
           regulatory subunit [Arabidopsis lyrata subsp. lyrata]
           gi|297307815|gb|EFH38628.1| 26S proteasome regulatory
           subunit [Arabidopsis lyrata subsp. lyrata]
           gi|297327528|gb|EFH57948.1| 26S proteasome regulatory
           subunit [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -2

Query: 189 KVALDIDYHHNMLSSHLKVNPKEVIVGWKS 100
           +VA+DIDYHHNML+SHLKVNPKE+IVGW S
Sbjct: 82  QVAVDIDYHHNMLASHLKVNPKEIIVGWYS 111


>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 189 KVALDIDYHHNMLSSHLKVNPKEVIVGWKS 100
           +VALDIDYHHNML SH KVNPKEVIVGW S
Sbjct: 76  QVALDIDYHHNMLLSHQKVNPKEVIVGWYS 105


>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
           [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 189 KVALDIDYHHNMLSSHLKVNPKEVIVGWKS 100
           +VALDIDYHHNML SH KVNPKEVIVGW S
Sbjct: 74  QVALDIDYHHNMLLSHQKVNPKEVIVGWYS 103


>emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera]
          Length = 354

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -2

Query: 186 VALDIDYHHNMLSSHLKVNPKEVIVGWKS 100
           VALDIDYHHNML SH KVNPKEVIVGW S
Sbjct: 144 VALDIDYHHNMLLSHQKVNPKEVIVGWYS 172


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