BLASTX nr result

ID: Atractylodes22_contig00017732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017732
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like prote...    98   8e-19
ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...    98   8e-19
ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
dbj|BAJ98645.1| predicted protein [Hordeum vulgare subsp. vulgar...    97   1e-18
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...    97   2e-18

>ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
           [Vitis vinifera] gi|296081172|emb|CBI18198.3| unnamed
           protein product [Vitis vinifera]
          Length = 109

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 97  MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 243
           MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49


>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 97  MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 243
           MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49


>ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|222842648|gb|EEE80195.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 97  MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 243
           MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49


>dbj|BAJ98645.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326513560|dbj|BAJ87799.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 101

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 85  QISAMASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 243
           Q +AMASEE+ AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   QPAAMASEEDVAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 53


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = +1

Query: 97  MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 243
           MA+EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49


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