BLASTX nr result

ID: Atractylodes22_contig00017661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017661
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]     71   3e-10
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...    64   5e-08
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]    64   5e-08
emb|CBI16457.3| unnamed protein product [Vitis vinifera]               63   9e-08
ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|2...    63   9e-08

>gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]
          Length = 1050

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -2

Query: 164 FCDILQDYLCPLTGLLFEDPVILENGQTYE*VAIAEWFSKGNK 36
           F +I +DY+CPLTG +FEDPV LE GQTYE VAI EWFSKGNK
Sbjct: 622 FLNIPEDYMCPLTGHIFEDPVTLETGQTYERVAIMEWFSKGNK 664


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1148

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
 Frame = -2

Query: 212 VQISMKKHIGGCRIL----LFCDILQDYLCPLTGLLFEDPVILENGQTYE*VAIAEWFSK 45
           ++ S K   G C+       F  I QD++CPLTG LFEDPV +E GQT+E  AI EWF++
Sbjct: 649 MESSAKDLHGNCQYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQ 708

Query: 44  GNK 36
           GN+
Sbjct: 709 GNR 711


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
 Frame = -2

Query: 212 VQISMKKHIGGCRIL----LFCDILQDYLCPLTGLLFEDPVILENGQTYE*VAIAEWFSK 45
           ++ S K   G C+       F  I QD++CPLTG LFEDPV +E GQT+E  AI EWF++
Sbjct: 649 MESSAKDLHGNCQYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQ 708

Query: 44  GNK 36
           GN+
Sbjct: 709 GNR 711


>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -2

Query: 164 FCDILQDYLCPLTGLLFEDPVILENGQTYE*VAIAEWFSKGNK 36
           F  I QD++CPLTG LFEDPV +E GQT+E  AI EWF++GN+
Sbjct: 605 FSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNR 647


>ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|222844917|gb|EEE82464.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -2

Query: 167 LFCDILQDYLCPLTGLLFEDPVILENGQTYE*VAIAEWFSKGNK 36
           +F  I  D++CPLTG LFEDPV LE GQT+E  AI EWF +GNK
Sbjct: 684 IFDSIPHDFICPLTGQLFEDPVTLETGQTFEREAIREWFDQGNK 727


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