BLASTX nr result

ID: Atractylodes22_contig00017647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017647
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45199.1| unknown [Medicago truncatula]                          139   2e-31
gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]                   138   5e-31
ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycin...   137   1e-30
ref|NP_178182.1| Rae1-like protein [Arabidopsis thaliana] gi|833...   136   2e-30
ref|XP_002887816.1| transducin family protein [Arabidopsis lyrat...   135   4e-30

>gb|AFK45199.1| unknown [Medicago truncatula]
          Length = 252

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/73 (84%), Positives = 67/73 (91%)
 Frame = -3

Query: 367 SKQRLKAMSRCNQSIPCGNFNNDGSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESE 188
           SKQRLKAM RC+Q IPCG FNNDGSIYAYAVCYDWSKGAENHNP+TAK  IY+HLPQESE
Sbjct: 180 SKQRLKAMQRCSQPIPCGTFNNDGSIYAYAVCYDWSKGAENHNPTTAKNYIYMHLPQESE 239

Query: 187 VKGKPRAGTVGRK 149
           VKGKPRAG+ GR+
Sbjct: 240 VKGKPRAGSTGRR 252


>gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]
          Length = 347

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/73 (87%), Positives = 66/73 (90%)
 Frame = -3

Query: 367 SKQRLKAMSRCNQSIPCGNFNNDGSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESE 188
           SKQRLKAMSRC+Q IPC  FN+DGSIYAYAVCYDWSKGAENHNPSTAKT IYLH PQESE
Sbjct: 275 SKQRLKAMSRCSQPIPCSAFNHDGSIYAYAVCYDWSKGAENHNPSTAKTYIYLHFPQESE 334

Query: 187 VKGKPRAGTVGRK 149
           VKGKPR GT GRK
Sbjct: 335 VKGKPRIGTSGRK 347


>ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycine max]
           gi|255638763|gb|ACU19686.1| unknown [Glycine max]
          Length = 347

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/73 (84%), Positives = 65/73 (89%)
 Frame = -3

Query: 367 SKQRLKAMSRCNQSIPCGNFNNDGSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESE 188
           SKQRLKAM RC+Q IPC  FNNDGSI+AYAVCYDWSKGAENHNP+TAK  IYLHLPQESE
Sbjct: 275 SKQRLKAMQRCSQPIPCSTFNNDGSIFAYAVCYDWSKGAENHNPATAKNYIYLHLPQESE 334

Query: 187 VKGKPRAGTVGRK 149
           VKGKPRAG  GRK
Sbjct: 335 VKGKPRAGATGRK 347


>ref|NP_178182.1| Rae1-like protein [Arabidopsis thaliana]
           gi|83305440|sp|Q38942.2|RAE1L_ARATH RecName:
           Full=Rae1-like protein At1g80670
           gi|6503279|gb|AAF14655.1|AC011713_3 F23A5.2(form2)
           [Arabidopsis thaliana] gi|21593271|gb|AAM65220.1| mRNA
           export protein, putative [Arabidopsis thaliana]
           gi|94442413|gb|ABF18994.1| At1g80670 [Arabidopsis
           thaliana] gi|332198314|gb|AEE36435.1| Rae1-like protein
           [Arabidopsis thaliana]
          Length = 349

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = -3

Query: 367 SKQRLKAMSRCNQSIPCGNFNNDGSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESE 188
           SKQRLKAMSRCNQ IPC +FN+DGSIYAYA CYDWSKGAENHNP+TAK+SI+LHLPQESE
Sbjct: 277 SKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESE 336

Query: 187 VKGKPRAGTVGRK 149
           VK KPR G  GRK
Sbjct: 337 VKAKPRVGATGRK 349


>ref|XP_002887816.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333657|gb|EFH64075.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score =  135 bits (339), Expect = 4e-30
 Identities = 60/73 (82%), Positives = 66/73 (90%)
 Frame = -3

Query: 367 SKQRLKAMSRCNQSIPCGNFNNDGSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESE 188
           SKQRLKAMSRCNQ IPC +FN+DGSIYAYA CYDWSKGAENHNP+TAK+SI+LHLPQE+E
Sbjct: 277 SKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQENE 336

Query: 187 VKGKPRAGTVGRK 149
           VK KPR G  GRK
Sbjct: 337 VKAKPRVGATGRK 349


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