BLASTX nr result

ID: Atractylodes22_contig00017452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017452
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522430.1| pentatricopeptide repeat-containing protein,...   109   2e-22
ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat...    99   3e-19
ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat...    98   6e-19
ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatul...    92   3e-17

>ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538315|gb|EEF39922.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 556

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/77 (66%), Positives = 65/77 (84%)
 Frame = -3

Query: 232 DMLEVNSKLKELVKSGRLSDARQVFDKLPHRDEVTWTILISGYVKASHSSEALSLFSNLW 53
           +MLE+NSKLK LVK+G L DARQ+FD++PHRDE++WT +ISGYV A  ++EAL+LFS +W
Sbjct: 47  NMLEINSKLKALVKTGCLQDARQMFDEMPHRDEISWTTIISGYVNAIDTTEALTLFSKMW 106

Query: 52  VDPTQRMDPFLLSQALK 2
           V P  RMDPF+LS ALK
Sbjct: 107 VVPGLRMDPFILSLALK 123


>ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/77 (61%), Positives = 61/77 (79%)
 Frame = -3

Query: 232 DMLEVNSKLKELVKSGRLSDARQVFDKLPHRDEVTWTILISGYVKASHSSEALSLFSNLW 53
           +MLE+NS+LK+LVK G+L  AR +FDK+ HRDE++WT LI+GYV AS S EAL LFSN+W
Sbjct: 56  NMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 115

Query: 52  VDPTQRMDPFLLSQALK 2
           V P  + D F++S ALK
Sbjct: 116 VHPGPQRDQFMISVALK 132


>ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/77 (59%), Positives = 61/77 (79%)
 Frame = -3

Query: 232 DMLEVNSKLKELVKSGRLSDARQVFDKLPHRDEVTWTILISGYVKASHSSEALSLFSNLW 53
           +MLE+NS+LK+LVK G+L  +R +FDK+ HRDE++WT LI+GYV AS S EAL LFSN+W
Sbjct: 89  NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 148

Query: 52  VDPTQRMDPFLLSQALK 2
           V P  + D F++S ALK
Sbjct: 149 VQPGLQRDQFMISVALK 165


>ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|222853161|gb|EEE90708.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/76 (59%), Positives = 60/76 (78%)
 Frame = -3

Query: 229 MLEVNSKLKELVKSGRLSDARQVFDKLPHRDEVTWTILISGYVKASHSSEALSLFSNLWV 50
           M E+N  LK LVK+G L++ARQ+FDK+  RDE++WT +ISGYV   +++EALSLFS +WV
Sbjct: 1   MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60

Query: 49  DPTQRMDPFLLSQALK 2
           +P   MDPF+LS ALK
Sbjct: 61  EPGLHMDPFILSLALK 76


>ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
           gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2
           [Medicago truncatula]
          Length = 1033

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/77 (54%), Positives = 63/77 (81%)
 Frame = -3

Query: 232 DMLEVNSKLKELVKSGRLSDARQVFDKLPHRDEVTWTILISGYVKASHSSEALSLFSNLW 53
           +M E+NS+LK+L+K G++ +AR +F+K+ HRDE++WT LI+GYV A++S+EAL LFSN+W
Sbjct: 83  NMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMW 142

Query: 52  VDPTQRMDPFLLSQALK 2
           VD   + D F++S ALK
Sbjct: 143 VDSGLQKDQFVVSVALK 159


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