BLASTX nr result

ID: Atractylodes22_contig00017448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017448
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC28528.1| GATA-1 zinc finger protein [Nicotiana tabacum]        141   2e-31
ref|XP_002316371.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_004149904.1| PREDICTED: GATA transcription factor 4-like ...   120   3e-25
ref|XP_002892428.1| zinc finger family protein [Arabidopsis lyra...   105   4e-25
ref|XP_002876270.1| BME3/BME3-ZF [Arabidopsis lyrata subsp. lyra...   118   2e-24

>emb|CAC28528.1| GATA-1 zinc finger protein [Nicotiana tabacum]
          Length = 305

 Score =  141 bits (355), Expect = 2e-31
 Identities = 79/150 (52%), Positives = 94/150 (62%), Gaps = 26/150 (17%)
 Frame = +3

Query: 417 FEAPSPDSVLERRSSGSTGKTISFGTEIAIPVRTRTKRSRPGSTTNPW------------ 560
           F+  SP SVLE  +S S GK+IS   +IAIPVR R+KR R  S  NPW            
Sbjct: 100 FQTQSPVSVLESSNSCSGGKSISIKHDIAIPVRPRSKRPR-SSALNPWILMPPISSTRFA 158

Query: 561 SRSPLQIPLGKEKKKRRIVCE--QGVNETKK------------CSHCEISKTPQWREGPM 698
           S+       GKEKK++  +    Q  + TKK            C+HC+++KTPQWREGP+
Sbjct: 159 SKKTCDARKGKEKKRKMSLLSVPQIADVTKKKTTSGQQFSFKKCTHCQVTKTPQWREGPL 218

Query: 699 GPKTLCNACGVRYRSGRLFPEYRPAASPTF 788
           GPKTLCNACGVRYRSGRLFPEYRPAASPTF
Sbjct: 219 GPKTLCNACGVRYRSGRLFPEYRPAASPTF 248


>ref|XP_002316371.1| predicted protein [Populus trichocarpa] gi|222865411|gb|EEF02542.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  125 bits (314), Expect = 1e-26
 Identities = 76/157 (48%), Positives = 88/157 (56%), Gaps = 23/157 (14%)
 Frame = +3

Query: 387 DKKPYSLPRSFEAPSPDSVLERRSSGSTGKTISFGTEIAIPV---RTRTKRSRPG---ST 548
           DKK  +    F+  SP SVLE  S  S  K      EI       R R+KR RP    S 
Sbjct: 119 DKKDSTPHHQFQTSSPVSVLESSSDCSGEKNAPRSPEIVASGKCGRARSKRPRPAAVPSD 178

Query: 549 TNPWSRSPLQI-------PLGKEKKKRRIVCEQGVNE----------TKKCSHCEISKTP 677
           +  ++ S L I       P  K+KKK + +   G  E           +KC HCEI+KTP
Sbjct: 179 SESFAESRLVIKIPEHVDPEHKKKKKIKFIVPSGTVEMNQNSQPQQAVRKCMHCEITKTP 238

Query: 678 QWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTF 788
           QWR GPMGPKTLCNACGVRY+SGRLFPEYRPAASPTF
Sbjct: 239 QWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF 275


>ref|XP_004149904.1| PREDICTED: GATA transcription factor 4-like [Cucumis sativus]
           gi|449490412|ref|XP_004158598.1| PREDICTED: GATA
           transcription factor 4-like [Cucumis sativus]
          Length = 327

 Score =  120 bits (302), Expect = 3e-25
 Identities = 69/157 (43%), Positives = 89/157 (56%), Gaps = 28/157 (17%)
 Frame = +3

Query: 402 SLPRSFEAPSPDSVLERRSSGSTG-KTISFGTEIAIPVRTRTKRSRPGSTTNP------- 557
           S P  F   SP SVL+  SS S+  +     T+     R R+KR RP +T  P       
Sbjct: 108 SPPSQFHISSPVSVLDSSSSSSSSDEKKPLSTKDGRRGRARSKRPRPTTTFIPRTPELTS 167

Query: 558 --------------WSRSPLQIPLGKEKKKRRIVCEQGVNET------KKCSHCEISKTP 677
                         ++ S   +PL K+ KK ++   +  N+T      +KC HCE++KTP
Sbjct: 168 PTNSGIKVSSESENYAESCPPLPLPKKTKKIKLTFRRDQNDTLNPQGVRKCLHCEVTKTP 227

Query: 678 QWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTF 788
           QWR GP+GPKTLCNACGVRY+SGRL+PEYRPAASPTF
Sbjct: 228 QWRAGPLGPKTLCNACGVRYKSGRLYPEYRPAASPTF 264


>ref|XP_002892428.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338270|gb|EFH68687.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 303

 Score =  105 bits (262), Expect(2) = 4e-25
 Identities = 76/183 (41%), Positives = 94/183 (51%), Gaps = 30/183 (16%)
 Frame = +3

Query: 330 CQPEAFKS-QLKLQQPTFLQDKKPYSLPRSFEAPSPDSVLERRSSGSTGKTISFGTEIAI 506
           C  EA  S    L Q +   D K   L   F++ SP SVLE  S GS     S    +A 
Sbjct: 90  CSSEALSSIDTTLHQSSAPPDIKVSKL---FQSLSPVSVLEN-SYGSLSTQNSGSQRLAF 145

Query: 507 PVR-TRTKRSRP----------GSTTNPWSRSPLQIPLGK-------EKKKRRI-VCEQG 629
           PV+  R+KR RP               P   +P +             KKKR+I +  + 
Sbjct: 146 PVKGMRSKRKRPTTLRLSYLFPSEPRKPEKSTPAESESESYYSSEQHAKKKRKIHLTTRT 205

Query: 630 VNET----------KKCSHCEISKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAAS 779
           V+ +          +KC+HCE +KTPQWREGP G KTLCNACGVR+RSGRL PEYRPA+S
Sbjct: 206 VSSSSEASNSDGIVRKCTHCETTKTPQWREGPKGRKTLCNACGVRFRSGRLVPEYRPASS 265

Query: 780 PTF 788
           PTF
Sbjct: 266 PTF 268



 Score = 35.8 bits (81), Expect(2) = 4e-25
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 56  DYFGDIFNILDLPVENLEGDGLAEDWASK---LGPIPSEVFREMLPPVSQIGVVNGG 217
           D+F D+ N LD P+E+++   +  DW ++   L P P ++F  +  P   I    GG
Sbjct: 20  DFFDDLINHLDCPLEDIDSTNVEGDWVARFQDLEPPPMDMFPSL--PSELISCATGG 74


>ref|XP_002876270.1| BME3/BME3-ZF [Arabidopsis lyrata subsp. lyrata]
           gi|297322108|gb|EFH52529.1| BME3/BME3-ZF [Arabidopsis
           lyrata subsp. lyrata]
          Length = 319

 Score =  118 bits (295), Expect = 2e-24
 Identities = 76/186 (40%), Positives = 101/186 (54%), Gaps = 39/186 (20%)
 Frame = +3

Query: 348 KSQLKLQQPTFLQDKKPYSLPRSFEAPSPDSVLERRSSGSTGKTISFGTEIAIPV---RT 518
           +S ++ ++ +F  +    S    F + SP SVLE  SS S+ +TI+  T + +P    R 
Sbjct: 92  ESLVEKKEDSFSTNTDSSSSHSQFRSSSPVSVLE--SSSSSSQTINT-TSLVLPGKHGRP 148

Query: 519 RTKRSRP---------GSTTNPWSRSPLQIP----------LGKEKKKRRIVCEQG---- 629
           RTKR RP          +     SR  ++IP          + K+KKK+  +        
Sbjct: 149 RTKRPRPPVQEKDRVKDNVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSG 208

Query: 630 -------------VNETKKCSHCEISKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRP 770
                         +E +KC HCE++KTPQWR GPMGPKTLCNACGVRY+SGRLFPEYRP
Sbjct: 209 IDLEVNGKNVDSYTSEQRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRP 268

Query: 771 AASPTF 788
           AASPTF
Sbjct: 269 AASPTF 274


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