BLASTX nr result

ID: Atractylodes22_contig00017357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017357
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|1...    84   2e-14
ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|1...    83   2e-14
ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isofo...    83   2e-14
ref|XP_002525271.1| 60S ribosomal protein L26, putative [Ricinus...    82   6e-14
ref|XP_004141862.1| PREDICTED: 60S ribosomal protein L26-1-like ...    79   3e-13

>ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|118483302|gb|ABK93553.1|
           unknown [Populus trichocarpa]
           gi|222853496|gb|EEE91043.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/62 (70%), Positives = 46/62 (74%)
 Frame = -3

Query: 508 TREKVNGSTVNVGINPSKCVITXXXXXXXXXXXXXXKAKGRAVADKDKGTKFTAEDIMQN 329
           TREKVNGSTVNVGINPSK VIT              KAKGRAV DK+KGTKFTAEDIMQN
Sbjct: 85  TREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAVGDKEKGTKFTAEDIMQN 144

Query: 328 ID 323
           +D
Sbjct: 145 VD 146


>ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|118483998|gb|ABK93886.1|
           unknown [Populus trichocarpa]
           gi|222841753|gb|EEE79300.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/62 (70%), Positives = 46/62 (74%)
 Frame = -3

Query: 508 TREKVNGSTVNVGINPSKCVITXXXXXXXXXXXXXXKAKGRAVADKDKGTKFTAEDIMQN 329
           TREKVNGSTVNVGINPSK VIT              KAKGRAV DKDKGTKFTAEDIMQ+
Sbjct: 85  TREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAVGDKDKGTKFTAEDIMQS 144

Query: 328 ID 323
           +D
Sbjct: 145 VD 146


>ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isoform 1 [Vitis vinifera]
           gi|359480547|ref|XP_003632488.1| PREDICTED: 60S
           ribosomal protein L26-1-like [Vitis vinifera]
           gi|359480553|ref|XP_003632490.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 2 [Vitis vinifera]
           gi|359480556|ref|XP_003632491.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 3 [Vitis vinifera]
           gi|147772865|emb|CAN75906.1| hypothetical protein
           VITISV_001974 [Vitis vinifera]
           gi|296087313|emb|CBI33687.3| unnamed protein product
           [Vitis vinifera] gi|296087319|emb|CBI33693.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/62 (70%), Positives = 46/62 (74%)
 Frame = -3

Query: 508 TREKVNGSTVNVGINPSKCVITXXXXXXXXXXXXXXKAKGRAVADKDKGTKFTAEDIMQN 329
           TREKVNGSTVNVGINPSK VIT              KAKGRA ADKDKGTKFTAEDIMQ+
Sbjct: 85  TREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQS 144

Query: 328 ID 323
           +D
Sbjct: 145 VD 146


>ref|XP_002525271.1| 60S ribosomal protein L26, putative [Ricinus communis]
           gi|223535429|gb|EEF37099.1| 60S ribosomal protein L26,
           putative [Ricinus communis]
          Length = 146

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/62 (69%), Positives = 45/62 (72%)
 Frame = -3

Query: 508 TREKVNGSTVNVGINPSKCVITXXXXXXXXXXXXXXKAKGRAVADKDKGTKFTAEDIMQN 329
           TREKVNGSTVNVGINPSK VIT              KAKGRA ADKDKGTKFT+EDIMQ 
Sbjct: 85  TREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTSEDIMQT 144

Query: 328 ID 323
           +D
Sbjct: 145 VD 146


>ref|XP_004141862.1| PREDICTED: 60S ribosomal protein L26-1-like isoform 1 [Cucumis
           sativus] gi|449448218|ref|XP_004141863.1| PREDICTED: 60S
           ribosomal protein L26-1-like isoform 2 [Cucumis sativus]
           gi|449499863|ref|XP_004160937.1| PREDICTED: 60S
           ribosomal protein L26-1-like [Cucumis sativus]
          Length = 146

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/62 (67%), Positives = 44/62 (70%)
 Frame = -3

Query: 508 TREKVNGSTVNVGINPSKCVITXXXXXXXXXXXXXXKAKGRAVADKDKGTKFTAEDIMQN 329
           TREKVNGSTVNVGI PSK VIT              K KGRA ADKDKGTKFTAEDIMQ+
Sbjct: 85  TREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQS 144

Query: 328 ID 323
           +D
Sbjct: 145 VD 146


Top