BLASTX nr result

ID: Atractylodes22_contig00017339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017339
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37668.1| gag protein [Populus trichocarpa]                       78   7e-13
gb|ABG37657.1| integrase [Populus trichocarpa]                         78   7e-13
emb|CAN73992.1| hypothetical protein VITISV_013958 [Vitis vinifera]    78   9e-13
ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259...    77   2e-12
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]    77   2e-12

>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/88 (47%), Positives = 60/88 (68%)
 Frame = -3

Query: 271 PIALNNPYAFSFGKRGKKSADLMDVFSQVMINLPLLDAIKQILAYSKFLKDMCTKKRKHK 92
           P AL  P+A S  ++   ++++++ F QV IN+PLLDAIKQ+ +Y+KFLKD+CT KR  K
Sbjct: 244 PPALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVKR--K 301

Query: 91  ASTPKKIKVIEQVNAILLSTLPQKCKDP 8
            +  KK  + EQV+AIL +    K KDP
Sbjct: 302 LNVKKKAFLAEQVSAILQNNNALKYKDP 329


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/88 (47%), Positives = 60/88 (68%)
 Frame = -3

Query: 271 PIALNNPYAFSFGKRGKKSADLMDVFSQVMINLPLLDAIKQILAYSKFLKDMCTKKRKHK 92
           P AL  P+A S  ++   ++++++ F QV IN+PLLDAIKQ+ +Y+KFLKD+CT KR  K
Sbjct: 96  PPALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVKR--K 153

Query: 91  ASTPKKIKVIEQVNAILLSTLPQKCKDP 8
            +  KK  + EQV+AIL +    K KDP
Sbjct: 154 LNVKKKAFLAEQVSAILQNNNALKYKDP 181


>emb|CAN73992.1| hypothetical protein VITISV_013958 [Vitis vinifera]
          Length = 641

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
 Frame = -3

Query: 346 PRLPHRTKNRKLGKVRELKVMNHHFPIALNN----PYAFSFGKRGKKSADLMDVFSQVMI 179
           P +    +N K  +  E  ++N +  ++++N    P A    K G K+ ++++V  QV I
Sbjct: 448 PTVEKNVRNEKASEKYEEVIVNKN-KMSVSNYLPFPSAMQRHKVGDKTLEILEVLKQVKI 506

Query: 178 NLPLLDAIKQILAYSKFLKDMCTKKRKHKASTPKKIKVIEQVNAILLSTLPQKCKDP 8
           N+PLLD IKQ+ AY+KFLKD+CT KR+ K S  KK  + EQV+AI+ +    K KDP
Sbjct: 507 NIPLLDMIKQVPAYAKFLKDLCTVKRRIKLS--KKAFLTEQVSAIIXNKAMVKYKDP 561


>ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259900 [Vitis vinifera]
          Length = 1409

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = -3

Query: 346 PRLPHRTKNRKLG-KVRELKVMNHHFPIALNNPY--AFSFGKRGKKSADLMDVFSQVMIN 176
           P +    +N K   K  E+ V  +   ++ + P+  A    K G K+ ++++V  QV IN
Sbjct: 473 PTVEKNVRNEKASEKYEEVIVSKNKMSVSNHLPFPSAMQRHKVGDKTLEILEVLKQVKIN 532

Query: 175 LPLLDAIKQILAYSKFLKDMCTKKRKHKASTPKKIKVIEQVNAILLSTLPQKCKDP 8
           +PLLD IKQ+ AY+KFLKD+CT KR+ K S  KK  + EQV+AI+ +    K KDP
Sbjct: 533 IPLLDMIKQVPAYAKFLKDLCTVKRRIKLS--KKAFLTEQVSAIIENKAMVKYKDP 586


>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = -3

Query: 346 PRLPHRTKNRKLG-KVRELKVMNHHFPIALNNPY--AFSFGKRGKKSADLMDVFSQVMIN 176
           P +    +N K   K  E+ V  +   ++ + P+  A    K G K+ ++++V  QV IN
Sbjct: 499 PTVEKNVRNEKASEKYEEVIVSKNKMSVSNHLPFPSAMQRHKVGDKTLEILEVLKQVKIN 558

Query: 175 LPLLDAIKQILAYSKFLKDMCTKKRKHKASTPKKIKVIEQVNAILLSTLPQKCKDP 8
           +PLLD IKQ+ AY+KFLKD+CT KR+ K S  KK  + EQV+AI+ +    K KDP
Sbjct: 559 IPLLDMIKQVPAYAKFLKDLCTVKRRIKLS--KKAFLTEQVSAIIENKAMVKYKDP 612


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