BLASTX nr result

ID: Atractylodes22_contig00017262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017262
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-21
ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-respon...    68   6e-21
ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-li...    65   6e-21
emb|CAC84709.1| aux/IAA protein [Populus tremula x Populus tremu...    67   2e-20
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...    71   4e-20

>ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|222844836|gb|EEE82383.1|
           predicted protein [Populus trichocarpa]
           gi|429326558|gb|AFZ78619.1| hypothetical protein
           [Populus tomentosa]
          Length = 290

 Score = 68.9 bits (167), Expect(2) = 2e-21
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 17/78 (21%)
 Frame = +1

Query: 4   VVGWPPIRRAHQMPILANRIKSES-KEYNSRAENKN----------------KTNGYLSV 132
           VVGWPPIR +H+M I+ N+ KS++ +E+NS  + KN                KT   L V
Sbjct: 122 VVGWPPIR-SHRMHIMVNQAKSQATEEFNSMNKRKNAVEEKVGNKNINIGNTKTRTSLFV 180

Query: 133 KVNMDGTLIGRKVDLNAH 186
           KVNMDGTLIGRKVDLNAH
Sbjct: 181 KVNMDGTLIGRKVDLNAH 198



 Score = 58.5 bits (140), Expect(2) = 2e-21
 Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 17/71 (23%)
 Frame = +2

Query: 245 VDLNAHSSYEMLARTLEDMFY--------AKLLSTET---------AGLLNGTSEFVLTY 373
           VDLNAH  YE LA+ LE+MF         A+L + E          + LL G+SEFVLTY
Sbjct: 193 VDLNAHGCYETLAQALENMFLRTTTTLNMARLSTPEHKIMIDAKRHSQLLGGSSEFVLTY 252

Query: 374 EDRDGDCMLVG 406
           ED+DGD MLVG
Sbjct: 253 EDKDGDWMLVG 263


>ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
           [Cucumis sativus]
          Length = 301

 Score = 68.2 bits (165), Expect(2) = 6e-21
 Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
 Frame = +2

Query: 245 VDLNAHSSYEMLARTLEDMFYA--KLLSTETAGLLNGTSEFVLTYEDRDGDCMLVG 406
           VDLNAHS YE LA  LEDMF++  K  + + + LL+G+SEFVLTYEDR+GD MLVG
Sbjct: 205 VDLNAHSCYETLALMLEDMFFSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVG 260



 Score = 57.4 bits (137), Expect(2) = 6e-21
 Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
 Frame = +1

Query: 4   VVGWPPIRRAHQMPILANRIKS----------ESKEYNSRAENKNKT-----NGYLS-VK 135
           VVGWPPIR  ++M  L N+ K+          E K+  S+   KNKT      G+L  VK
Sbjct: 135 VVGWPPIR-TYRMNSLVNQAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVK 193

Query: 136 VNMDGTLIGRKVDLNAHS 189
           VN+DG +IGRKVDLNAHS
Sbjct: 194 VNVDGVVIGRKVDLNAHS 211


>ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
          Length = 296

 Score = 65.1 bits (157), Expect(2) = 6e-21
 Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
 Frame = +2

Query: 245 VDLNAHSSYEMLARTLEDMFYAK------LLSTETAGLLNGTSEFVLTYEDRDGDCMLVG 406
           VDL+AHS YE LA+TLE+MF         + ST  + LL+G+S+FVLTYED++GD MLVG
Sbjct: 196 VDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLTYEDKEGDWMLVG 255



 Score = 60.5 bits (145), Expect(2) = 6e-21
 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 25/87 (28%)
 Frame = +1

Query: 4   VVGWPPIRRAHQMPILANRIKS-----------ESKEYNSRAEN----KNKTNGYLS--- 129
           VVGWPPIR A++M  LAN+ KS           +SK  N+  EN     N TNGY     
Sbjct: 117 VVGWPPIR-AYRMNSLANQSKSLVTEDLNSMVEKSKSTNTMVENTYNGSNNTNGYAKKKG 175

Query: 130 -------VKVNMDGTLIGRKVDLNAHS 189
                  VKVNMDG  IGRKVDL+AHS
Sbjct: 176 PLNTSFFVKVNMDGIPIGRKVDLSAHS 202


>emb|CAC84709.1| aux/IAA protein [Populus tremula x Populus tremuloides]
          Length = 289

 Score = 67.0 bits (162), Expect(2) = 2e-20
 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 17/78 (21%)
 Frame = +1

Query: 4   VVGWPPIRRAHQMPILANRIKSES-KEYNSRAENKN----------------KTNGYLSV 132
           VVGWPPIR +H+M I+ N+ KS++ +E+NS  + KN                KT   L V
Sbjct: 121 VVGWPPIR-SHRMHIMVNQAKSQATEEFNSMNKRKNAVEEKVGNKNINIGNTKTRTSLFV 179

Query: 133 KVNMDGTLIGRKVDLNAH 186
           KVNMDGTLIGRKVDL+AH
Sbjct: 180 KVNMDGTLIGRKVDLSAH 197



 Score = 56.6 bits (135), Expect(2) = 2e-20
 Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 17/71 (23%)
 Frame = +2

Query: 245 VDLNAHSSYEMLARTLEDMFY--------AKLLSTET---------AGLLNGTSEFVLTY 373
           VDL+AH  YE LA+ LE+MF         A+L + E          + LL G+SEFVLTY
Sbjct: 192 VDLSAHGCYETLAQALENMFLRTTTTLNMARLSTPEYKIMIDAKRHSQLLGGSSEFVLTY 251

Query: 374 EDRDGDCMLVG 406
           ED+DGD MLVG
Sbjct: 252 EDKDGDWMLVG 262


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
           gi|223532214|gb|EEF34018.1| Auxin-responsive protein
           IAA13, putative [Ricinus communis]
          Length = 318

 Score = 70.9 bits (172), Expect(2) = 4e-20
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 11/65 (16%)
 Frame = +2

Query: 245 VDLNAHSSYEMLARTLEDMFYA-----------KLLSTETAGLLNGTSEFVLTYEDRDGD 391
           VDLNAH+SYE LA+TLEDMF+            K  ST+ + LL+G+SEFVLTYED++GD
Sbjct: 213 VDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSSEFVLTYEDKEGD 272

Query: 392 CMLVG 406
            MLVG
Sbjct: 273 WMLVG 277



 Score = 52.0 bits (123), Expect(2) = 4e-20
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 20/82 (24%)
 Frame = +1

Query: 4   VVGWPPIRRAHQMPILANRIKS-------------ESKEYNSRAENKNKTN------GYL 126
           +VGWPP+R  +++  L N+ K+             +SK+ + +  N +KTN      G+L
Sbjct: 139 IVGWPPVR-TYRINSLVNQAKASRSEEDKSVVEQDKSKDASKKICNGSKTNATNNEKGHL 197

Query: 127 S-VKVNMDGTLIGRKVDLNAHS 189
             VKVNMDG  IGRKVDLNAH+
Sbjct: 198 GFVKVNMDGIPIGRKVDLNAHA 219


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