BLASTX nr result

ID: Atractylodes22_contig00017260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017260
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21155.3| unnamed protein product [Vitis vinifera]              364   1e-98
ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   359   4e-97
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...   358   7e-97
ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co...   358   9e-97
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   353   2e-95

>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  364 bits (934), Expect = 1e-98
 Identities = 184/240 (76%), Positives = 186/240 (77%), Gaps = 1/240 (0%)
 Frame = +3

Query: 45  DGRHTDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 221
           DGRH D+S                GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG
Sbjct: 149 DGRHNDSSALPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 208

Query: 222 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKX 401
           RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK 
Sbjct: 209 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKS 268

Query: 402 XXXXXXXXXXXXXGHMAIRSKEGAXXXXXXXXXXXXXXXXXQNSELVLTPNVPDITVVPP 581
                        GHMAIRSKEGA                 QNSELVLTPNVPDI V PP
Sbjct: 269 VSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNQNSELVLTPNVPDIMVSPP 328

Query: 582 EDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFGFLFELGSKEHTYYVWRLYSFAQ 761
           EDDHL HVIDTMALYVLDGGCAFEQAIMERGRGN LF FLFELGSKEHTYYVWRLYSFAQ
Sbjct: 329 EDDHLHHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQ 388


>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  359 bits (921), Expect = 4e-97
 Identities = 180/239 (75%), Positives = 184/239 (76%)
 Frame = +3

Query: 45  DGRHTDTSTXXXXXXXXXXXXXXXGKPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGR 224
           DGRHT+ S                  PGSFDDGDPQTTNLYVGNLSP+VDENFLLRTFGR
Sbjct: 149 DGRHTEHSISSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRTFGR 208

Query: 225 FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXX 404
           FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK  
Sbjct: 209 FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSV 268

Query: 405 XXXXXXXXXXXXGHMAIRSKEGAXXXXXXXXXXXXXXXXXQNSELVLTPNVPDITVVPPE 584
                       GHMAIRSKEG+                 QNSELVLTPNVPDI V PPE
Sbjct: 269 ALPSQALPAPPPGHMAIRSKEGSTVILSGPSGPPVTTVPNQNSELVLTPNVPDIMVTPPE 328

Query: 585 DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFGFLFELGSKEHTYYVWRLYSFAQ 761
           DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGN LF FLF LGSKEHTYYVWRLYSFAQ
Sbjct: 329 DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFVLGSKEHTYYVWRLYSFAQ 387


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
           gi|223545356|gb|EEF46861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 979

 Score =  358 bits (919), Expect = 7e-97
 Identities = 182/239 (76%), Positives = 185/239 (77%)
 Frame = +3

Query: 45  DGRHTDTSTXXXXXXXXXXXXXXXGKPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGR 224
           DGR  + S                GK GSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGR
Sbjct: 149 DGRTVEISAPSSRFDELPDDFDPSGK-GSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGR 207

Query: 225 FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXX 404
           FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK  
Sbjct: 208 FGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSV 267

Query: 405 XXXXXXXXXXXXGHMAIRSKEGAXXXXXXXXXXXXXXXXXQNSELVLTPNVPDITVVPPE 584
                       GHMAIRSKEGA                  NSELVLTPNVPDI VVPP+
Sbjct: 268 ALPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNHNSELVLTPNVPDIMVVPPD 327

Query: 585 DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFGFLFELGSKEHTYYVWRLYSFAQ 761
           DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLF FLFELGSKEHTYYVWRLYSFAQ
Sbjct: 328 DDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFNFLFELGSKEHTYYVWRLYSFAQ 386


>ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Cucumis sativus] gi|449493301|ref|XP_004159248.1|
           PREDICTED: U2 snRNP-associated SURP motif-containing
           protein-like [Cucumis sativus]
          Length = 961

 Score =  358 bits (918), Expect = 9e-97
 Identities = 180/240 (75%), Positives = 184/240 (76%), Gaps = 1/240 (0%)
 Frame = +3

Query: 45  DGRHTDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 221
           +GRH + ST               GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG
Sbjct: 148 EGRHGEISTPSSRFDELPDDFDPSGKFPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 207

Query: 222 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKX 401
           RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR DGQAAKDEMQGV+VY YELKIGWGK 
Sbjct: 208 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRVDGQAAKDEMQGVVVYGYELKIGWGKS 267

Query: 402 XXXXXXXXXXXXXGHMAIRSKEGAXXXXXXXXXXXXXXXXXQNSELVLTPNVPDITVVPP 581
                        GHMAIRSKEG                  QNSELVLTPN+PDITV PP
Sbjct: 268 VALPSQALPAPPPGHMAIRSKEGGTVILSGSSGPPVTSVPNQNSELVLTPNIPDITVEPP 327

Query: 582 EDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFGFLFELGSKEHTYYVWRLYSFAQ 761
           EDDHLRHVIDTMALYVLDGGC FEQAIMERGRGN LF FLFELGSKEHTYYVWRLYSFAQ
Sbjct: 328 EDDHLRHVIDTMALYVLDGGCVFEQAIMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQ 387


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  353 bits (907), Expect = 2e-95
 Identities = 183/250 (73%), Positives = 187/250 (74%), Gaps = 11/250 (4%)
 Frame = +3

Query: 45  DGRHTDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 221
           +GRHT++S                GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG
Sbjct: 149 EGRHTESSAPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFG 208

Query: 222 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKX 401
           RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGK 
Sbjct: 209 RFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKS 268

Query: 402 XXXXXXXXXXXXXGHMAIRSKE----------GAXXXXXXXXXXXXXXXXXQNSELVLTP 551
                        G MAIRSKE          GA                 QNSELVLTP
Sbjct: 269 VALPSQALPAPPPGQMAIRSKEVCYGFLPKPIGATVILSGPSGPPVTSVPNQNSELVLTP 328

Query: 552 NVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFGFLFELGSKEHTY 731
           NVPDI V PPEDDHLRHVIDTMALYVLDGGCAFEQAIM+RGRGN LF FLFELGSKEHTY
Sbjct: 329 NVPDIMVAPPEDDHLRHVIDTMALYVLDGGCAFEQAIMQRGRGNPLFNFLFELGSKEHTY 388

Query: 732 YVWRLYSFAQ 761
           YVWRLYSFAQ
Sbjct: 389 YVWRLYSFAQ 398


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