BLASTX nr result

ID: Atractylodes22_contig00017228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017228
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   354   3e-95
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   354   3e-95
ref|XP_002530707.1| DNA polymerase delta small subunit, putative...   348   2e-93
ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arab...   346   9e-93
ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni...   342   2e-91

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
            gi|297739835|emb|CBI30017.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score =  354 bits (909), Expect = 3e-95
 Identities = 177/246 (71%), Positives = 197/246 (80%)
 Frame = +2

Query: 914  QSMDEIFEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECI 1093
            +S+DE F I+KE Y+GQQYSQIY+ RLH++RTLIYSL+PNWKPHLPVCTVLGLEEGKECI
Sbjct: 17   ESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECI 76

Query: 1094 IVGTLYKHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLNGSVLSPS 1273
            IVGTLYKHMKLKP IL EYSKERS  PLV P NF+H DD+LVLEDESGRV L G++L PS
Sbjct: 77   IVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGTMLLPS 136

Query: 1274 VYVTGNVVALHGKETSGGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXX 1453
            VYVTG VV LHGKETS G+FLV+DIL+A LPPQ++LP +S EDKY               
Sbjct: 137  VYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVGSSTSN 196

Query: 1454 XXXXXXXVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEP 1633
                   VDHITGHLGDEKEQ  AAQIV VV+AGNSV +   LLNGQNLASKDQSRLSEP
Sbjct: 197  PLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNGQNLASKDQSRLSEP 256

Query: 1634 IKELDI 1651
            IKELDI
Sbjct: 257  IKELDI 262


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  354 bits (909), Expect = 3e-95
 Identities = 178/246 (72%), Positives = 198/246 (80%)
 Frame = +2

Query: 914  QSMDEIFEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECI 1093
            +S+DE F I+KE Y+GQQYSQIY+ RLH++RTLIYSL+PNWKPHLPVCTVLGLEEGKECI
Sbjct: 17   ESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECI 76

Query: 1094 IVGTLYKHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLNGSVLSPS 1273
            IVGTLYKHMKLKP IL EYSKERS  PLV P NF+H DD+LVLEDESGRV L G++L PS
Sbjct: 77   IVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGTMLLPS 136

Query: 1274 VYVTGNVVALHGKETSGGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXX 1453
            VYVTG VV LHGKETS G+FLV+DIL+A LPPQ++LP +S EDKY               
Sbjct: 137  VYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVGSSXSN 196

Query: 1454 XXXXXXXVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEP 1633
                   VDHITGHLGDEKEQ  AAQIV VV+AGNSV +   LLNGQNLASKDQSRLSEP
Sbjct: 197  PLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNGQNLASKDQSRLSEP 256

Query: 1634 IKELDI 1651
            IKELDI
Sbjct: 257  IKELDI 262


>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
            gi|223529721|gb|EEF31661.1| DNA polymerase delta small
            subunit, putative [Ricinus communis]
          Length = 425

 Score =  348 bits (894), Expect = 2e-93
 Identities = 175/246 (71%), Positives = 195/246 (79%)
 Frame = +2

Query: 917  SMDEIFEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECII 1096
            S+DE +EIQ E Y+GQQYSQIY+ RLH+IRTL+YSL+P WK HLPVCTVLGL EGKECII
Sbjct: 18   SLDETYEIQNETYRGQQYSQIYFARLHMIRTLLYSLVPLWKSHLPVCTVLGLVEGKECII 77

Query: 1097 VGTLYKHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLNGSVLSPSV 1276
            VGTLYKHMKLKP IL EYSKERSA PLV P NF+H DD LVLEDESGRV L G +L+PS 
Sbjct: 78   VGTLYKHMKLKPCILDEYSKERSAIPLVKPHNFMHLDDHLVLEDESGRVKLGGDMLTPSA 137

Query: 1277 YVTGNVVALHGKETSGGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXX 1456
            YVTG VVALHGKET  GDF+V D+LEAGLPPQ++LP +S EDKY                
Sbjct: 138  YVTGLVVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDKYVVFVSGLNVGSSTFNP 197

Query: 1457 XXXXXXVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPI 1636
                  VDHITGHLG+EKEQ  AA+IV VV+AGNSV+I H LLNGQNLASKDQSRLSEP+
Sbjct: 198  LQFQLLVDHITGHLGNEKEQAIAAEIVHVVIAGNSVEIPHGLLNGQNLASKDQSRLSEPV 257

Query: 1637 KELDIF 1654
            KELDIF
Sbjct: 258  KELDIF 263


>ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
            lyrata] gi|297327661|gb|EFH58081.1| hypothetical protein
            ARALYDRAFT_483299 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  346 bits (888), Expect = 9e-93
 Identities = 169/247 (68%), Positives = 194/247 (78%)
 Frame = +2

Query: 911  NQSMDEIFEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKEC 1090
            N   DE FEIQKEMY+GQQYSQIY++RLHL+RTL+YSL P WKPHLPVC VLGLE+GKEC
Sbjct: 17   NSLQDERFEIQKEMYRGQQYSQIYFVRLHLMRTLLYSLAPTWKPHLPVCKVLGLEKGKEC 76

Query: 1091 IIVGTLYKHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLNGSVLSP 1270
            +IVGTL+KHMKLKP +L EYSKERS TPLV P NF+HPDD L+LEDESGRV L GS LSP
Sbjct: 77   VIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDESGRVKLAGSALSP 136

Query: 1271 SVYVTGNVVALHGKETSGGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXX 1450
            ++YVTG VVALHGKET+ G+F VED+LEAGLPPQ++ P +  +DKY              
Sbjct: 137  AIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQDDKYVVLLSGLCIGSKSA 196

Query: 1451 XXXXXXXXVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSE 1630
                    VDHITGHLGDE+EQ  AAQIV VV+AGNSV+   +L+NGQNLASKDQS L E
Sbjct: 197  IPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSVEFPRKLINGQNLASKDQSTLYE 256

Query: 1631 PIKELDI 1651
            PIKELDI
Sbjct: 257  PIKELDI 263


>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  342 bits (877), Expect = 2e-91
 Identities = 170/253 (67%), Positives = 197/253 (77%)
 Frame = +2

Query: 893  RCAHYQNQSMDEIFEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGL 1072
            +CA+    S+DE FEI KE Y+GQQYSQIY+ RLHL+RTL+YSL+P+WKP+ PVCTVLGL
Sbjct: 7    QCAY---ASLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSPVCTVLGL 63

Query: 1073 EEGKECIIVGTLYKHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLN 1252
            EEGKEC+IVGTLYKHMKLKP IL EYSKERS  PLV P NF+HPDD LVLEDESGRV L+
Sbjct: 64   EEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKLS 123

Query: 1253 GSVLSPSVYVTGNVVALHGKETSGGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXX 1432
            G ++SPS YVTG VVAL GKET  GDFLV+D+L+AGLPPQ++ P +S EDKY        
Sbjct: 124  GYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDKYVVLVSGLS 183

Query: 1433 XXXXXXXXXXXXXXVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKD 1612
                          +DHITGHLGDEKEQ  A+QI QVV AGN ++I H LLNGQNLASKD
Sbjct: 184  VGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIAQVVFAGNLIEIPHRLLNGQNLASKD 243

Query: 1613 QSRLSEPIKELDI 1651
             SR++EPIKELDI
Sbjct: 244  LSRMAEPIKELDI 256


Top