BLASTX nr result

ID: Atractylodes22_contig00017207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017207
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154877.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    61   8e-08
ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    61   8e-08
ref|XP_003597650.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   5e-06

>ref|XP_004154877.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Cucumis sativus]
          Length = 469

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = -3

Query: 437 YTISKFCEQNVS----VHTFKLVSIVLDPTDVDIINRWIGLIIKKDVKVLELNIHTRRSP 270
           + +  F EQ +     +  FKL +   +P  + +++RWI  +++  V+ LE+ +      
Sbjct: 62  FHLINFVEQTLKQLKCLRKFKLHTDFPEPNSMVVVDRWIDYVLESGVQELEIVV------ 115

Query: 269 LREDLPTQRPQSYRLPNXXXXXXXXXXLRIYKCELPSSLMVDGVKFKSLKSLSLDGISID 90
                  +  + Y LP           L +  C+L  SL  DG K  S+KS+SL G+  +
Sbjct: 116 -----TVENGKRYNLPQRVFANQSLTVLTVGDCKLCPSL--DGYKLLSMKSVSLLGVFAE 168

Query: 89  EEVIKYLATNCPLLEELIVERCHGFK 12
           +E +K L +NCP ++ + ++ C G +
Sbjct: 169 DETVKRLVSNCPFIQHIKLDSCLGLR 194


>ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Cucumis sativus]
          Length = 469

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = -3

Query: 437 YTISKFCEQNVS----VHTFKLVSIVLDPTDVDIINRWIGLIIKKDVKVLELNIHTRRSP 270
           + +  F EQ +     +  FKL +   +P  + +++RWI  +++  V+ LE+ +      
Sbjct: 62  FHLINFVEQTLKQLKCLRKFKLHTDFPEPNSMVVVDRWIDYVLESGVQELEIVV------ 115

Query: 269 LREDLPTQRPQSYRLPNXXXXXXXXXXLRIYKCELPSSLMVDGVKFKSLKSLSLDGISID 90
                  +  + Y LP           L +  C+L  SL  DG K  S+KS+SL G+  +
Sbjct: 116 -----TVENGKRYNLPQRVFANQSLTVLTVGDCKLCPSL--DGYKLLSMKSVSLLGVFAE 168

Query: 89  EEVIKYLATNCPLLEELIVERCHGFK 12
           +E +K L +NCP ++ + ++ C G +
Sbjct: 169 DETVKRLVSNCPFIQHIKLDSCLGLR 194


>ref|XP_003597650.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355486698|gb|AES67901.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 607

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/147 (25%), Positives = 63/147 (42%)
 Frame = -3

Query: 443 VAYTISKFCEQNVSVHTFKLVSIVLDPTDVDIINRWIGLIIKKDVKVLELNIHTRRSPLR 264
           VA ++  +   N  +H F L     D TD  +++ W+   + +D+K ++L +  + S L 
Sbjct: 142 VADSLHTYLANNAQIHKFLLHMTSFDLTDAPLVDSWLTSAVSQDIKEIDLQVGFKDSKL- 200

Query: 263 EDLPTQRPQSYRLPNXXXXXXXXXXLRIYKCELPSSLMVDGVKFKSLKSLSLDGISIDEE 84
                     Y LP           LR+  C L S      +    L+ L L  I + E 
Sbjct: 201 ----------YTLPEVVLSSETLTGLRLSGCILQS---FSNIMLPRLQKLYLRKIHLSEL 247

Query: 83  VIKYLATNCPLLEELIVERCHGFKRFC 3
           ++  L + CP +E+L + +C G K  C
Sbjct: 248 ILLSLISRCPSIEDLRLIQCSGLKFLC 274


Top