BLASTX nr result

ID: Atractylodes22_contig00017175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017175
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79134.1| hypothetical protein VITISV_000843 [Vitis vinifera]    60   1e-07
emb|CAN62588.1| hypothetical protein VITISV_028559 [Vitis vinifera]    59   4e-07
gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo]        58   7e-07
emb|CAN70453.1| hypothetical protein VITISV_035056 [Vitis vinifera]    57   1e-06
ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cuc...    57   2e-06

>emb|CAN79134.1| hypothetical protein VITISV_000843 [Vitis vinifera]
          Length = 1253

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/119 (34%), Positives = 56/119 (47%)
 Frame = +3

Query: 75   PTVPTDTRFTKVYVRQHRRQVSETQESLPVHNAFGESPVPSPETPAEPSVPLTVHPDSDA 254
            P++PT           H    S T  SLP H  FG SP  S   P     P+ +  D D 
Sbjct: 746  PSIPTHI---------HASSSSVTDLSLPSH--FGPSPEISAPEPGLGLAPIVLAQDLDL 794

Query: 255  PPVQXXXXXXXXXXXXGAPLPDIPIAVRKGTRSCTRYPIHNYLAYSHLSPDSCAYTTSI 431
                                 D+PIA+RKGTR+CT++PI  Y++YS+LS +  A+TT+I
Sbjct: 795  ---------------------DLPIALRKGTRACTKHPISKYISYSNLSDNYRAFTTNI 832


>emb|CAN62588.1| hypothetical protein VITISV_028559 [Vitis vinifera]
          Length = 874

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/119 (34%), Positives = 55/119 (46%)
 Frame = +3

Query: 75  PTVPTDTRFTKVYVRQHRRQVSETQESLPVHNAFGESPVPSPETPAEPSVPLTVHPDSDA 254
           P++PT           H    S T  SLP H  FG SP  S   P     P+    D D 
Sbjct: 392 PSIPTHI---------HASSSSVTDLSLPSH--FGPSPEISAPEPGLGLAPIVPAQDLDL 440

Query: 255 PPVQXXXXXXXXXXXXGAPLPDIPIAVRKGTRSCTRYPIHNYLAYSHLSPDSCAYTTSI 431
                                D+PIA+RKGTR+CT++PI  Y++YS+LS +  A+TT+I
Sbjct: 441 ---------------------DLPIALRKGTRACTKHPITKYISYSNLSDNYKAFTTNI 478


>gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo]
          Length = 412

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 309 PLPDIPIAVRKGTRSCTRYPIHNYLAYSHLSPDSCAYTTSIDT 437
           P  D+PIA+RKGTRSCT++ I NY++Y +LSP   A+TTS+D+
Sbjct: 131 PSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTTSLDS 173


>emb|CAN70453.1| hypothetical protein VITISV_035056 [Vitis vinifera]
          Length = 703

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
 Frame = +3

Query: 108 VYVRQHRRQVSETQESLPVHN---AFGESPVPSPETPAEPSVPLTVHPDSDAPPVQXXXX 278
           VY R+   + S+ Q  +P H    A G   +     P  PS+P  +H  S +        
Sbjct: 186 VYSRKKVPRRSKDQPIIPAHGQPKALGNGSLNVSGNP--PSIPTQIHVSSSSVADLSLPS 243

Query: 279 XXXXXXXXGAPLP---------------DIPIAVRKGTRSCTRYPIHNYLAYSHLSPDSC 413
                    AP P               D+PIA+RKGTR+CT++PI  Y++YS+LS +  
Sbjct: 244 HFGPIPEISAPEPGLGLAPIVPAQDLDLDLPIALRKGTRACTKHPIAKYISYSNLSDNYK 303

Query: 414 AYTTSI 431
           ++TT+I
Sbjct: 304 SFTTNI 309


>ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cucumis sativus]
          Length = 2105

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = +3

Query: 309  PLPDIPIAVRKGTRSCTRYPIHNYLAYSHLSPDSCAYTTSIDT 437
            P  DIPIA+RK TRSCT++PI NY++Y +LSP   A+T S+D+
Sbjct: 1278 PSLDIPIALRKDTRSCTKHPICNYVSYDNLSPQFRAFTASLDS 1320


Top