BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017171
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...    94   1e-17
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...    85   5e-15
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...    81   1e-13
gb|AFK40175.1| unknown [Medicago truncatula]                           74   2e-11
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru...    74   2e-11

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 51/118 (43%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
 Frame = +3

Query: 12  LHSYTDVTLEFNDEHEDAIEVVPTSPAGQNDVH-LESFDATPIMNGSKHTLGKPLELVTP 188
           ++S  DV +  +DEHE+  E +  +P+ ++  H  + FD+    NG+  + GKP   VTP
Sbjct: 89  IYSSNDVDMILSDEHEEIKEDILGTPSDRSGRHHADPFDSAQRTNGNSSSYGKPSNHVTP 148

Query: 189 FGQRKDKFVVHSTLNSLPTVHDIKKEQGEENSDDYEIRRVQPIKRCSLEILCSQPAPG 362
           FG+R  KFVV  T+N+ P+  + K E   EN DD  IRRVQP KRCSL +  S+P PG
Sbjct: 149 FGKRTSKFVVQLTVNNPPSAENGKNENKFENVDDDIIRRVQPSKRCSLLVHGSRPGPG 206


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
 Frame = +3

Query: 12  LHSYTDVTLEFNDEHEDAIEVVPTSPAGQND-VHLESFDATPIMNGSKHTLGKPLELVTP 188
           ++S  DV +  NDE ED  E VP +P  ++  ++ E FD+     G+ ++ GK  + VTP
Sbjct: 88  IYSSKDVDMILNDEGEDLKEEVPGTPTDESQKLNSEPFDSIIKSTGNGYSSGKRSKHVTP 147

Query: 189 FGQRKDKFVVHSTLNSLPTVHDIKKEQGEENSDDYEIRRVQPIKRCSLEILCSQPAPG 362
           FG+R DKFVV   +N+LP   +   E   EN +D  I+RVQP K+CS  +  S P PG
Sbjct: 148 FGRRTDKFVVKFNINNLPDTENGDNEHVRENMEDDIIKRVQPRKKCSFVVHGSGPEPG 205


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
           gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
           polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
 Frame = +3

Query: 12  LHSYT--DVTLEFNDEHEDAIEVVPTSPAGQND-VHLESFDATPIMNGSKHTLGKPLELV 182
           LH Y+  DV +  NDE+ED  E +  +P G++  +H E  D TP  N    + GKP +  
Sbjct: 85  LHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHE 144

Query: 183 TPFGQRKDKFVVHSTLNSLPTVHDIKKEQGEENSDDYEIRRVQPIKRCSLEI 338
           TPFGQR +KFVV   +N++P +    K    EN +D  I++V+P++ CSL +
Sbjct: 145 TPFGQRTEKFVVRFNINNMPDMVTAVKVDNSENDEDTIIKKVRPLQGCSLTV 196


>gb|AFK40175.1| unknown [Medicago truncatula]
          Length = 447

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = +3

Query: 3   QQGLHSYT--DVTLEFNDEHEDAIEVVPTSPAGQNDVHLESFDATPIMNGSKHTLGKPLE 176
           + GLH Y+  DV +  ND+  D  +  P++P             TP + G+    GKP +
Sbjct: 82  ETGLHLYSIGDVEMILNDD--DTKDDTPSTPTNNRQDVYSPIHDTPSLYGNILASGKPAD 139

Query: 177 LVTPFGQRKDKFVVHSTLNSLPTVHDIKKEQGEENSDDYEIRRVQPI---KRCSLEILCS 347
           LVTPF +R D+F V  ++N++P V + K+E   EN ++ E   V  I   KRCSL I  S
Sbjct: 140 LVTPFSKRTDRFAVKFSINTIPDVENGKQELNHENEENDEYNIVSKIVSRKRCSLVIHGS 199

Query: 348 QPAPG 362
            P PG
Sbjct: 200 GPKPG 204


>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
           gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
           B [Medicago truncatula]
          Length = 616

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = +3

Query: 3   QQGLHSYT--DVTLEFNDEHEDAIEVVPTSPAGQNDVHLESFDATPIMNGSKHTLGKPLE 176
           + GLH Y+  DV +  ND+  D  +  P++P             TP + G+    GKP +
Sbjct: 82  ETGLHLYSIGDVEMILNDD--DTKDDTPSTPTNNRQDVYSPIHDTPSLYGNILASGKPAD 139

Query: 177 LVTPFGQRKDKFVVHSTLNSLPTVHDIKKEQGEENSDDYEIRRVQPI---KRCSLEILCS 347
           LVTPF +R D+F V  ++N++P V + K+E   EN ++ E   V  I   KRCSL I  S
Sbjct: 140 LVTPFSKRTDRFAVKFSINTIPDVENGKQELNHENEENDEYNIVSKIVSRKRCSLVIHGS 199

Query: 348 QPAPG 362
            P PG
Sbjct: 200 GPKPG 204