BLASTX nr result

ID: Atractylodes22_contig00017054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017054
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    65   6e-09
ref|XP_002454042.1| hypothetical protein SORBIDRAFT_04g023620 [S...    59   5e-07
ref|XP_002514390.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_003609920.1| RING-H2 finger protein ATL3J [Medicago trunc...    57   1e-06
ref|XP_003609919.1| RING finger protein [Medicago truncatula] gi...    57   1e-06

>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/71 (35%), Positives = 44/71 (61%)
 Frame = +3

Query: 18  CLLELPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHQKH 197
           C ++L + +FE+LQ   GS + +C +C  ++ ++ ++ QL RC HVFH EC+   L +  
Sbjct: 52  CEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQ 111

Query: 198 TSCPFCCTPVF 230
            +CP C + +F
Sbjct: 112 FTCPLCRSFIF 122


>ref|XP_002454042.1| hypothetical protein SORBIDRAFT_04g023620 [Sorghum bicolor]
           gi|241933873|gb|EES07018.1| hypothetical protein
           SORBIDRAFT_04g023620 [Sorghum bicolor]
          Length = 359

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
 Frame = +3

Query: 30  LPIIQFEDLQNRHGSVDRM------CFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHQ 191
           LP++ F +++ +H  VD        C +C  ++D DD L  L  C H FH EC+G  L +
Sbjct: 97  LPLVFFREVR-QHRIVDGRGDDALECSVCLLEFDDDDALRLLPTCPHAFHPECIGLWL-E 154

Query: 192 KHTSCPFCCTPVFSGISPVPCSSC*KHQ 275
           +H +CP C   V     P P  +  +HQ
Sbjct: 155 RHATCPLCRASVLDAPPPPPAPAAAQHQ 182


>ref|XP_002514390.1| conserved hypothetical protein [Ricinus communis]
           gi|223546487|gb|EEF47986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 85

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 18  CLLELPIIQFEDLQN-RHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHQK 194
           C+  +   +F +LQ    GS + +C IC  ++++ D + Q+SRC H+FH +C+ K L + 
Sbjct: 12  CINGVAAARFGELQRCGSGSDENLCCICLVEFEEGDEVSQVSRCMHLFHLDCIAKWLQRH 71

Query: 195 HTSCPFCCTPVF 230
           + +CP C + VF
Sbjct: 72  NFTCPLCRSLVF 83


>ref|XP_003609920.1| RING-H2 finger protein ATL3J [Medicago truncatula]
           gi|355510975|gb|AES92117.1| RING-H2 finger protein ATL3J
           [Medicago truncatula]
          Length = 146

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
 Frame = +3

Query: 18  CLLELPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHQKH 197
           C   LP+  F +++ RH   +  C +C      +D + +L  C HVFH EC+ K L   H
Sbjct: 42  CCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGH 101

Query: 198 ------TSCPFCCTPVFSGI 239
                  +CP C  P+ + +
Sbjct: 102 DNENHNQTCPLCRAPLINSV 121


>ref|XP_003609919.1| RING finger protein [Medicago truncatula]
           gi|355510974|gb|AES92116.1| RING finger protein
           [Medicago truncatula] gi|388516109|gb|AFK46116.1|
           unknown [Medicago truncatula]
          Length = 169

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +3

Query: 18  CLLELPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHQKH 197
           C   LP+  F +++ RH   +  C +C      +D + +L  C HVFH EC+ K L   H
Sbjct: 56  CCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGH 115

Query: 198 ------TSCPFCCTPVFSGIS 242
                  +CP C  P+ +  S
Sbjct: 116 DNENHNQTCPLCRAPLINSYS 136


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