BLASTX nr result

ID: Atractylodes22_contig00017042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017042
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    66   3e-09
ref|XP_002514390.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_003609919.1| RING finger protein [Medicago truncatula] gi...    57   2e-06
gb|AFK48359.1| unknown [Lotus japonicus]                               56   3e-06
ref|XP_003609920.1| RING-H2 finger protein ATL3J [Medicago trunc...    55   5e-06

>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 26/71 (36%), Positives = 43/71 (60%)
 Frame = +3

Query: 18  CLLDLPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGELLHRKH 197
           C + L + +FE+LQ   GS + +C +C  ++ ++ ++ QL RC HVFH EC+   L R  
Sbjct: 52  CEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQ 111

Query: 198 TSCPFCCTPVF 230
            +CP C + +F
Sbjct: 112 FTCPLCRSFIF 122


>ref|XP_002514390.1| conserved hypothetical protein [Ricinus communis]
           gi|223546487|gb|EEF47986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 85

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 18  CLLDLPIIQFEDLQN-RHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGELLHRK 194
           C+  +   +F +LQ    GS + +C IC  ++++ D + Q+SRC H+FH +C+ + L R 
Sbjct: 12  CINGVAAARFGELQRCGSGSDENLCCICLVEFEEGDEVSQVSRCMHLFHLDCIAKWLQRH 71

Query: 195 HTSCPFCCTPVF 230
           + +CP C + VF
Sbjct: 72  NFTCPLCRSLVF 83


>ref|XP_003609919.1| RING finger protein [Medicago truncatula]
           gi|355510974|gb|AES92116.1| RING finger protein
           [Medicago truncatula] gi|388516109|gb|AFK46116.1|
           unknown [Medicago truncatula]
          Length = 169

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
 Frame = +3

Query: 18  CLLDLPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGELLHRKH 197
           C   LP+  F +++ RH   +  C +C      +D + +L  C HVFH EC+ + L   H
Sbjct: 56  CCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGH 115

Query: 198 ------TSCPFCCTPVFSGISPVS-CSSC 263
                  +CP C  P+ +  S  S  SSC
Sbjct: 116 DNENHNQTCPLCRAPLINSYSLSSEISSC 144


>gb|AFK48359.1| unknown [Lotus japonicus]
          Length = 137

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
 Frame = +3

Query: 30  LPIIQFEDLQNR---HGSVD-----RMCFICSADYDKDDVLCQLSRCGHVFHSECVGELL 185
           LP+ +FEDL+ +    G  D     ++C IC  +++ +D + +L R GHVFH  C+ + L
Sbjct: 54  LPVARFEDLRRQCCCEGGDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWL 113

Query: 186 HRKHTSCPFCCTPVFS 233
            R   SCP C + +FS
Sbjct: 114 DRCQFSCPLCRSFLFS 129


>ref|XP_003609920.1| RING-H2 finger protein ATL3J [Medicago truncatula]
           gi|355510975|gb|AES92117.1| RING-H2 finger protein ATL3J
           [Medicago truncatula]
          Length = 146

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
 Frame = +3

Query: 18  CLLDLPIIQFEDLQNRHGSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGELLHRKH 197
           C   LP+  F +++ RH   +  C +C      +D + +L  C HVFH EC+ + L   H
Sbjct: 42  CCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGH 101

Query: 198 ------TSCPFCCTPVFSGI 239
                  +CP C  P+ + +
Sbjct: 102 DNENHNQTCPLCRAPLINSV 121


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