BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017036
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   160   2e-49
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              138   9e-46
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   138   9e-46
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   144   5e-43
ref|XP_002885593.1| hypothetical protein ARALYDRAFT_898915 [Arab...   117   1e-37

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  160 bits (404), Expect(2) = 2e-49
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = +3

Query: 93  VRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDP 272
           +++L E  LKNF K+AST FF+ YG ISHQINSYNDFI  GIQ VFDS+GEI +EPGYDP
Sbjct: 52  IKELGESFLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDP 111

Query: 273 SKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLP 404
           SK+G+ +W++AS+KFGKVTLERP+FW G+KFS  GGK YLD LP
Sbjct: 112 SKRGDGDWKHASVKFGKVTLERPKFWAGEKFSVGGGKEYLDLLP 155



 Score = 61.6 bits (148), Expect(2) = 2e-49
 Identities = 27/43 (62%), Positives = 38/43 (88%)
 Frame = +1

Query: 499 HARLQNMTYSSRMKVQITKEVYTQELVRSDKFKTGKEKYLDKK 627
           HARLQNMTYS+R+ V+   +VYT++LVRSDKFKTG ++++DK+
Sbjct: 157 HARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKE 199


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  138 bits (347), Expect(2) = 9e-46
 Identities = 65/104 (62%), Positives = 78/104 (75%)
 Frame = +3

Query: 93  VRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDP 272
           + DL++  LK F K+ + SFF  YGLI HQINS+NDFIK GIQ VFDS GEI +EPGYDP
Sbjct: 74  IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 133

Query: 273 SKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLP 404
           SK+G  +WRYAS++FGKVTLERPR W G    +  GK  L+FLP
Sbjct: 134 SKRGEGDWRYASVRFGKVTLERPRVWAG----ESDGKESLNFLP 173



 Score = 71.6 bits (174), Expect(2) = 9e-46
 Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
 Frame = +1

Query: 499 HARLQNMTYSSRMKVQITKEVYTQELVRSDKFKTGKE-KYLDKKVI 633
           HARLQNMTYSSRMK Q+  +VYTQ+LVRSDK+KTGK+ KY++KKVI
Sbjct: 175 HARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVI 220


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
           vinifera]
          Length = 1198

 Score =  138 bits (347), Expect(2) = 9e-46
 Identities = 65/104 (62%), Positives = 78/104 (75%)
 Frame = +3

Query: 93  VRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDP 272
           + DL++  LK F K+ + SFF  YGLI HQINS+NDFIK GIQ VFDS GEI +EPGYDP
Sbjct: 38  IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 97

Query: 273 SKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLP 404
           SK+G  +WRYAS++FGKVTLERPR W G    +  GK  L+FLP
Sbjct: 98  SKRGEGDWRYASVRFGKVTLERPRVWAG----ESDGKESLNFLP 137



 Score = 71.6 bits (174), Expect(2) = 9e-46
 Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
 Frame = +1

Query: 499 HARLQNMTYSSRMKVQITKEVYTQELVRSDKFKTGKE-KYLDKKVI 633
           HARLQNMTYSSRMK Q+  +VYTQ+LVRSDK+KTGK+ KY++KKVI
Sbjct: 139 HARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVI 184


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  144 bits (362), Expect(2) = 5e-43
 Identities = 63/96 (65%), Positives = 80/96 (83%)
 Frame = +3

Query: 117 LKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDPSKKGNNEW 296
           L+NF K+AS  FF+ YG+ISHQI+SYNDFI+ GIQ VFDS+GEI +EPGYDPSKKG  +W
Sbjct: 68  LRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDW 127

Query: 297 RYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLP 404
           ++AS+KFGKVTL+RP+FW G+KFS   G+ YL+  P
Sbjct: 128 KHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLNLWP 163



 Score = 56.6 bits (135), Expect(2) = 5e-43
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = +1

Query: 499 HARLQNMTYSSRMKVQITKEVYTQELVRSDKFKTGKEKYLDKKVI 633
           HARLQNMTYS+R+ V+    V+T++LVRSDKFKTG E+++DK+ +
Sbjct: 165 HARLQNMTYSARIIVET--HVFTKKLVRSDKFKTGVEQFVDKECV 207


>ref|XP_002885593.1| hypothetical protein ARALYDRAFT_898915 [Arabidopsis lyrata subsp.
           lyrata] gi|297331433|gb|EFH61852.1| hypothetical protein
           ARALYDRAFT_898915 [Arabidopsis lyrata subsp. lyrata]
          Length = 505

 Score =  117 bits (293), Expect(2) = 1e-37
 Identities = 55/105 (52%), Positives = 79/105 (75%)
 Frame = +3

Query: 90  SVRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYD 269
           ++ +L E  L++F K+A+TSFF  YGLISHQ+NSYN FI+ G+QDVF+S G++ +EP +D
Sbjct: 18  NLSELGESFLQSFCKKAATSFFDKYGLISHQLNSYNFFIQHGLQDVFESFGDMLVEPSFD 77

Query: 270 PSKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLP 404
             KK +N+WRYA++KFGKVT+E+P F++ DK         L+FLP
Sbjct: 78  VIKKKDNDWRYATVKFGKVTVEKPTFFSDDK--------ELEFLP 114



 Score = 65.1 bits (157), Expect(2) = 1e-37
 Identities = 26/49 (53%), Positives = 43/49 (87%)
 Frame = +1

Query: 499 HARLQNMTYSSRMKVQITKEVYTQELVRSDKFKTGKEKYLDKKVIDTEE 645
           HARLQNMTYS+R+KV +  EV+ + +V+SDKFKTG+++Y++KK+++ ++
Sbjct: 116 HARLQNMTYSARIKVNVQVEVFIKTVVKSDKFKTGQDEYVEKKILEVKK 164