BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017035
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   595   e-168
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   592   e-166
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              589   e-166
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   589   e-166
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   580   e-163

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  595 bits (1535), Expect = e-168
 Identities = 284/443 (64%), Positives = 350/443 (79%)
 Frame = -2

Query: 1331 EVSIGSIPVMVNSDSCWMSRVEKDDCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSP 1152
            +V IG IPVMVNS+ CWM+ V+K DC++D GGYFI KGAEKTFIAQE+L L R+W++++P
Sbjct: 207  DVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNP 266

Query: 1151 NWRVQYRSVHKRKRVYVKLADTPKVEDIGGGAQVITAYILSLKDIPIWILFFALGVASDK 972
             W V YR   KRKRVY+KL +T K+E I GG + ++ YIL+  ++PIW+LFFALGV+SD+
Sbjct: 267  TWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYILA--EMPIWVLFFALGVSSDR 324

Query: 971  EVVDLIDADIKDGNIVNILIASIHDADQTCNEFRKGRNSLKFVDEVLKDSKFPPKESVKE 792
            EVV+LID DI+D  IVNIL+ASIH+AD+ C +FRKG+ +L +VD ++K+ KFPP+ESV+E
Sbjct: 325  EVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEE 384

Query: 791  CIENYLFPNIIGFSRKARYLGYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLN 612
            CI  YLFPN+ GF +KAR+LGYMVKCLL  + GRRKVDN+DDFRNK            L 
Sbjct: 385  CINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELR 444

Query: 611  VHLRHAKMRMVKSMQRDLYPDRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINME 432
             H++HA+ RMVK+MQRDLY DR +QPI+    YLDASIITNGLSRAFSTG W H Y  ME
Sbjct: 445  AHIKHAERRMVKAMQRDLYGDRQVQPIEH---YLDASIITNGLSRAFSTGHWCHPYKRME 501

Query: 431  KTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCG 252
            + SGVVA LRR NPLQM ADMR++RQQV Y GK GDARYPHPSHWGK+CFLSTPDGENCG
Sbjct: 502  RVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCG 561

Query: 251  LIKNLAGTALVSTTVRERLSDILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSTS 72
            L+KNLA   LVST + +   + L  CGM+KLVDD STSL G  KV +DG+WVG+C++S  
Sbjct: 562  LVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSAL 621

Query: 71   FVAEFRRKRRRKEVPHQVEIKRD 3
            FV++ RRKRRR EVPHQVE+KRD
Sbjct: 622  FVSKLRRKRRRNEVPHQVEVKRD 644


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  592 bits (1525), Expect = e-166
 Identities = 291/449 (64%), Positives = 351/449 (78%)
 Frame = -2

Query: 1349 IDTEEGEVSIGSIPVMVNSDSCWMSRVEKDDCDYDQGGYFIIKGAEKTFIAQERLGLDRV 1170
            I  +  +V IG IPVM+ SD CWM+ VEK DCD+D GGYF+IKGAEKTFIAQE++ L R+
Sbjct: 8    ISEDNRDVIIGRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQEQICLKRL 67

Query: 1169 WLASSPNWRVQYRSVHKRKRVYVKLADTPKVEDIGGGAQVITAYILSLKDIPIWILFFAL 990
            W+++SP+W V YR V KRKRVY+KL + PK E I GG +V++ Y  S  + PIWILFFAL
Sbjct: 68   WVSNSPSWTVAYRDVSKRKRVYIKL-EPPKREHIRGGEKVLSVYF-SAVEFPIWILFFAL 125

Query: 989  GVASDKEVVDLIDADIKDGNIVNILIASIHDADQTCNEFRKGRNSLKFVDEVLKDSKFPP 810
            G +SDKEVV+LID D +D  IVN+LIASI+DAD+ C  FR+GRN++  + + +++ KFPP
Sbjct: 126  GASSDKEVVNLIDCDGEDSRIVNVLIASIYDADENCKGFRRGRNAINDIMKKIENCKFPP 185

Query: 809  KESVKECIENYLFPNIIGFSRKARYLGYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXX 630
            +ES++  + NYLFPN+ GF +KAR+LGYMVKCLL+ YTGRRK+DN+DDFRNK        
Sbjct: 186  QESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGEL 245

Query: 629  XXXXLNVHLRHAKMRMVKSMQRDLYPDRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTH 450
                L VH++HA+ RMVK+MQRDLY +R +  I+    YLDASIITNGLSRAFSTG+W+H
Sbjct: 246  LERELRVHVKHAERRMVKAMQRDLYGERVIHAIEH---YLDASIITNGLSRAFSTGAWSH 302

Query: 449  AYINMEKTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTP 270
             Y  ME+ SGVVA LRR NPLQ IADMR+TRQQV Y GK GDARYPHPSHWGKICFLSTP
Sbjct: 303  PYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTP 362

Query: 269  DGENCGLIKNLAGTALVSTTVRERLSDILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGI 90
            DGENCGL+KNLA T LVST + E   D LL  GMEKLVDDTST L G  KVF+DG+WVG+
Sbjct: 363  DGENCGLVKNLAITGLVSTNIEEHFLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNWVGV 422

Query: 89   CKNSTSFVAEFRRKRRRKEVPHQVEIKRD 3
            C +S SFVA  RRKRRRKEVPHQVEIKRD
Sbjct: 423  CGDSVSFVAALRRKRRRKEVPHQVEIKRD 451


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  589 bits (1519), Expect = e-166
 Identities = 293/455 (64%), Positives = 350/455 (76%), Gaps = 4/455 (0%)
 Frame = -2

Query: 1355 KVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKDDCDYDQGGYFIIKGAEKTFIAQERLGLD 1176
            KVI  +  ++ IG IPVMV S+ CWM+ VE+ DC+YD GGYF+IKGAEKTFIAQE++ L 
Sbjct: 218  KVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLK 277

Query: 1175 RVWLASSPNWRVQYRSVHKRKRVYVKLADTPKVEDIGGGAQVITAYILSLKDIPIWILFF 996
            R+W++S+P W V YR + KRKRVYVKL + PK E+  GG +V+T Y  S  +IPIWILFF
Sbjct: 278  RLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYFSST-EIPIWILFF 335

Query: 995  ALGVASDKEVVDLIDADIKDGNIVNILIASIHDADQTCNE----FRKGRNSLKFVDEVLK 828
            ALG +SDKEVVDLID +I D  I NIL+ASIH+AD+   +    FR+  N++ FVD+++K
Sbjct: 336  ALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVK 395

Query: 827  DSKFPPKESVKECIENYLFPNIIGFSRKARYLGYMVKCLLEGYTGRRKVDNKDDFRNKXX 648
              KFPP ES++ECI  YLFPN  G  +KAR+LGYMVKCLL+ YTGRRK DN+DDFRNK  
Sbjct: 396  SCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRL 455

Query: 647  XXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYPDRDLQPIDQFHRYLDASIITNGLSRAFS 468
                      L VH+RHA+ RMVK+MQR+LY DRDL+PI+    YLDASIITNGLSRAFS
Sbjct: 456  ELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIEN---YLDASIITNGLSRAFS 512

Query: 467  TGSWTHAYINMEKTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKI 288
            TG W+H +  ME+ SGVVA LRR NPLQM ADMR+TRQQV Y GK GDARYPHPSHWGK+
Sbjct: 513  TGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKV 572

Query: 287  CFLSTPDGENCGLIKNLAGTALVSTTVRERLSDILLACGMEKLVDDTSTSLCGMDKVFVD 108
            CFLSTPDGENCGL+KNLA T LVST V + L D L  CGMEKLVDDTST L G +KVF+D
Sbjct: 573  CFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLD 632

Query: 107  GDWVGICKNSTSFVAEFRRKRRRKEVPHQVEIKRD 3
            GDWVG+C++  SFV E R KRR KE+P QVEIKRD
Sbjct: 633  GDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRD 667


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  589 bits (1519), Expect = e-166
 Identities = 293/455 (64%), Positives = 350/455 (76%), Gaps = 4/455 (0%)
 Frame = -2

Query: 1355 KVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKDDCDYDQGGYFIIKGAEKTFIAQERLGLD 1176
            KVI  +  ++ IG IPVMV S+ CWM+ VE+ DC+YD GGYF+IKGAEKTFIAQE++ L 
Sbjct: 182  KVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLK 241

Query: 1175 RVWLASSPNWRVQYRSVHKRKRVYVKLADTPKVEDIGGGAQVITAYILSLKDIPIWILFF 996
            R+W++S+P W V YR + KRKRVYVKL + PK E+  GG +V+T Y  S  +IPIWILFF
Sbjct: 242  RLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYFSST-EIPIWILFF 299

Query: 995  ALGVASDKEVVDLIDADIKDGNIVNILIASIHDADQTCNE----FRKGRNSLKFVDEVLK 828
            ALG +SDKEVVDLID +I D  I NIL+ASIH+AD+   +    FR+  N++ FVD+++K
Sbjct: 300  ALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVK 359

Query: 827  DSKFPPKESVKECIENYLFPNIIGFSRKARYLGYMVKCLLEGYTGRRKVDNKDDFRNKXX 648
              KFPP ES++ECI  YLFPN  G  +KAR+LGYMVKCLL+ YTGRRK DN+DDFRNK  
Sbjct: 360  SCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRL 419

Query: 647  XXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYPDRDLQPIDQFHRYLDASIITNGLSRAFS 468
                      L VH+RHA+ RMVK+MQR+LY DRDL+PI+    YLDASIITNGLSRAFS
Sbjct: 420  ELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIEN---YLDASIITNGLSRAFS 476

Query: 467  TGSWTHAYINMEKTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKI 288
            TG W+H +  ME+ SGVVA LRR NPLQM ADMR+TRQQV Y GK GDARYPHPSHWGK+
Sbjct: 477  TGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKV 536

Query: 287  CFLSTPDGENCGLIKNLAGTALVSTTVRERLSDILLACGMEKLVDDTSTSLCGMDKVFVD 108
            CFLSTPDGENCGL+KNLA T LVST V + L D L  CGMEKLVDDTST L G +KVF+D
Sbjct: 537  CFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLD 596

Query: 107  GDWVGICKNSTSFVAEFRRKRRRKEVPHQVEIKRD 3
            GDWVG+C++  SFV E R KRR KE+P QVEIKRD
Sbjct: 597  GDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRD 631


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  580 bits (1495), Expect = e-163
 Identities = 277/441 (62%), Positives = 344/441 (78%)
 Frame = -2

Query: 1340 EEGEVSIGSIPVMVNSDSCWMSRVEKDDCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLA 1161
            ++ +V IG IPVMVNS+ CWMS  ++ DC++D GGYFI+KGAEK FIAQE++ L R+W++
Sbjct: 210  DKRDVFIGRIPVMVNSELCWMSGADRPDCEFDHGGYFIVKGAEKIFIAQEQICLKRLWVS 269

Query: 1160 SSPNWRVQYRSVHKRKRVYVKLADTPKVEDIGGGAQVITAYILSLKDIPIWILFFALGVA 981
            +   W V YRS  KR RVY+KL +T K E I G A+ ++ Y  +  ++PIW+LFFALGV+
Sbjct: 270  NHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAKALSVYFFA--EMPIWVLFFALGVS 327

Query: 980  SDKEVVDLIDADIKDGNIVNILIASIHDADQTCNEFRKGRNSLKFVDEVLKDSKFPPKES 801
            SD+EVVDLID DIKD NI+NIL+ASIHDAD+ C +FRKG+ +L +VD ++K  KFPP+ES
Sbjct: 328  SDREVVDLIDVDIKDTNIINILVASIHDADKNCEDFRKGKKALAYVDRLVKSCKFPPQES 387

Query: 800  VKECIENYLFPNIIGFSRKARYLGYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXX 621
            V+ECI+ YLFPN+ G  +KAR+LGYMVKCLL  Y GRRKVDN+DDFRNK           
Sbjct: 388  VEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLER 447

Query: 620  XLNVHLRHAKMRMVKSMQRDLYPDRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTHAYI 441
             L VH++HA+ RMVK++QRDL  DR +QPI+    YLDASIITNGLSRAFSTG W H Y 
Sbjct: 448  ELRVHVKHAERRMVKALQRDLCGDRQVQPIEH---YLDASIITNGLSRAFSTGHWCHPYK 504

Query: 440  NMEKTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTPDGE 261
             ME+ SGVVA LRR NPLQM AD+R+TRQQV Y GK GDARYPHPSHWGK+CFLSTPDGE
Sbjct: 505  RMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGE 564

Query: 260  NCGLIKNLAGTALVSTTVRERLSDILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKN 81
            NCGL+KNLA   LVSTTV + L + L  CGM+KLVDD++TSL G  KV +DGDWVG+C++
Sbjct: 565  NCGLVKNLASMGLVSTTVLKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCED 624

Query: 80   STSFVAEFRRKRRRKEVPHQV 18
            S  FV++ RR+RRR EVPHQ+
Sbjct: 625  SALFVSKLRRQRRRNEVPHQL 645