BLASTX nr result

ID: Atractylodes22_contig00016892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016892
         (1482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   293   1e-76
ref|XP_003633069.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   290   9e-76
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...   287   6e-75
ref|XP_002264800.1| PREDICTED: zinc finger CCCH domain-containin...   286   7e-75
ref|XP_002272321.1| PREDICTED: zinc finger CCCH domain-containin...   286   7e-75

>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223549969|gb|EEF51456.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 445

 Score =  293 bits (749), Expect = 1e-76
 Identities = 160/378 (42%), Positives = 213/378 (56%), Gaps = 3/378 (0%)
 Frame = +2

Query: 356  VFKRLGRGNQENIARNHP---VVCKYWLEGRCTRNPCRFLHPEPAKHSPKQSKYAWKNPN 526
            VF RLG G Q + + N P    VC +W  GRC R PC +LH E     P        N +
Sbjct: 15   VFNRLG-GAQLSSSTNDPRQQKVCHHWRAGRCNRFPCPYLHRELPPPPPPHGS----NGH 69

Query: 527  SVKSENSPPIEKAQQNVLKNKVDHGQNQSVPKTKQKLLTSEVNVGQSKSIQKVDCGQNQS 706
            S  + N+P          K    +    S P   ++      N   + S  +V    N  
Sbjct: 70   SSSNNNAPS---------KRGFSNDSGFSGPSGSRR----SGNFNNASSWGRVGNNSN-- 114

Query: 707  IPKIQQKLLTSEVNVGESKCIQKEHKLCDDWVTENCTKDDKCKKLHSWLCGNGLSMVALL 886
                              K ++K  K+C+ WV   C+  DKC+ LHSW  G   S++  L
Sbjct: 115  ------------------KVLRKTEKVCNFWVQGKCSYGDKCRFLHSWNLGESFSLLTQL 156

Query: 887  EGHTKAVTGIVLPSGSDKLYCGSKDKSLRVWDCNSGQCGVVVGFDDECGTLVNEGPWILV 1066
            +GH K VTGI LPSGSDKLY GSKD+++RVWDC SGQC  V+    E G +++EGPWI V
Sbjct: 157  DGHQKVVTGIALPSGSDKLYTGSKDETVRVWDCQSGQCMAVIQLGGEVGCMISEGPWIFV 216

Query: 1067 GLRDMIKAWNLNTQHELLVRGSGGQVNAITMFEDILFAGMEDGTILSWKSTSEISFSEVP 1246
            G+ +++KAWN  T  +L + G  GQV A+ +  D+LFAG +DG IL WK  +     E  
Sbjct: 217  GIPNVVKAWNTQTNTDLSLTGPVGQVYALVVGNDLLFAGTQDGAILVWKYNAATFNFEPA 276

Query: 1247 TSLEGHTKSVLSLIVGAKKLFSGSADHTIRVWDAESLECLHVLNGHTGEVTTVLCWDHYL 1426
             SL GHT +V+SL+VGA +L+SGS DH+IRVW+ E+L+C+  L  HT  V +VLCWD +L
Sbjct: 277  ASLPGHTVAVVSLVVGANRLYSGSMDHSIRVWNLETLQCVQTLTDHTSVVMSVLCWDQFL 336

Query: 1427 LSGSLDKKIKVWGATKSG 1480
            LS SLD+KIKVW AT+SG
Sbjct: 337  LSCSLDQKIKVWAATESG 354


>ref|XP_003633069.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 48-like [Vitis vinifera]
          Length = 473

 Score =  290 bits (741), Expect = 9e-76
 Identities = 155/385 (40%), Positives = 226/385 (58%), Gaps = 7/385 (1%)
 Frame = +2

Query: 347  DVSVFKRLGRGNQENIARNHPVVCKYWLEGRCTRNPCRFLHPEPAKHSPKQ-----SKYA 511
            D+   + +G  N+      + +VC YWL GRC RNPCRFLH E  +++  Q      K  
Sbjct: 2    DIKPSRSVGDKNERGRRHVNNMVCSYWLRGRCNRNPCRFLHQELPQNTHYQVSNQFRKNC 61

Query: 512  W-KNPNS-VKSENSPPIEKAQQNVLKNKVDHGQNQSVPKTKQKLLTSEVNVGQSKSIQKV 685
            W +NP+S  KS +S             K     NQS    +++ L S+   G+  S   +
Sbjct: 62   WQRNPDSDSKSASSLTSLDRSSGSTTPKCTSASNQSHRNNRERTLYSDQK-GEWDSTN-L 119

Query: 686  DCGQNQSIPKIQQKLLTSEVNVGESKCIQKEHKLCDDWVTENCTKDDKCKKLHSWLCGNG 865
             C  +Q+          ++  +GE  C    H         NC + DKC+ LHSW  G+G
Sbjct: 120  RCSSSQTRAGSSSGNGITQKVIGERVCKYXLHG--------NCVEADKCQYLHSWFKGHG 171

Query: 866  LSMVALLEGHTKAVTGIVLPSGSDKLYCGSKDKSLRVWDCNSGQCGVVVGFDDECGTLVN 1045
            +  +A L GH KA++GIVLPSGS+KLY  S+D  +RVWDC++GQC  VV    E G+L++
Sbjct: 172  VFKLAKLNGHIKAISGIVLPSGSEKLYTASRDGYIRVWDCHTGQCDGVVNLGGEIGSLIS 231

Query: 1046 EGPWILVGLRDMIKAWNLNTQHELLVRGSGGQVNAITMFEDILFAGMEDGTILSWKSTSE 1225
             GPW+  G++D++KAWN+ +  +L + G  GQ+ A+ +  D+LFAG E+GTI +WK + E
Sbjct: 232  AGPWVFAGIKDVVKAWNIESCADLSLDGPVGQIYAMVVDHDMLFAGAENGTIYAWKPSKE 291

Query: 1226 ISFSEVPTSLEGHTKSVLSLIVGAKKLFSGSADHTIRVWDAESLECLHVLNGHTGEVTTV 1405
             +  E+ T+L GH  +V SL VG  +L+SGS D+TIRVWD  +L+C+H L  H   V ++
Sbjct: 292  TNAFELATTLGGHNCAVFSLTVGGGRLYSGSLDNTIRVWDLNTLQCIHTLKEHASVVMSL 351

Query: 1406 LCWDHYLLSGSLDKKIKVWGATKSG 1480
            +CW  YL+S SLD+KIKVW AT++G
Sbjct: 352  VCWGPYLISCSLDQKIKVWFATEAG 376


>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            48-like [Cucumis sativus]
          Length = 432

 Score =  287 bits (734), Expect = 6e-75
 Identities = 151/375 (40%), Positives = 209/375 (55%)
 Frame = +2

Query: 356  VFKRLGRGNQENIARNHPVVCKYWLEGRCTRNPCRFLHPEPAKHSPKQSKYAWKNPNSVK 535
            VF+RLG  + ++  RN  V C +W  G+C+R PC +LH E                    
Sbjct: 10   VFQRLGAPSGDS--RNQKV-CFHWRAGKCSRYPCPYLHREL------------------- 47

Query: 536  SENSPPIEKAQQNVLKNKVDHGQNQSVPKTKQKLLTSEVNVGQSKSIQKVDCGQNQSIPK 715
              N PP          +   +G   +  K      + + +V   +       G       
Sbjct: 48   --NGPP----------HAASNGAANAASKRGHGFASDDSSVSVPRRSPNFSGGSTWG--- 92

Query: 716  IQQKLLTSEVNVGESKCIQKEHKLCDDWVTENCTKDDKCKKLHSWLCGNGLSMVALLEGH 895
                     V+ G ++ I+K  KLC+ WV  NCT  DKC+ LHSW  G   S +  L+GH
Sbjct: 93   --------RVHGGGNRIIRKTEKLCNFWVQGNCTFGDKCRYLHSWSLGESFSHLTQLDGH 144

Query: 896  TKAVTGIVLPSGSDKLYCGSKDKSLRVWDCNSGQCGVVVGFDDECGTLVNEGPWILVGLR 1075
             K +TGI  PSGSDKLY GSKD+++RVWDC SGQC  ++    + G+++ EGPW+ VG+ 
Sbjct: 145  QKVITGITFPSGSDKLYTGSKDETVRVWDCQSGQCMAIINLGGQVGSMIAEGPWVFVGIP 204

Query: 1076 DMIKAWNLNTQHELLVRGSGGQVNAITMFEDILFAGMEDGTILSWKSTSEISFSEVPTSL 1255
            + +KAWN+ T  +L + G  G V ++ +  D+LFAG +DG+IL+WK     +  E   SL
Sbjct: 205  NCVKAWNIQTSADLSLSGPVGLVYSLVVGNDLLFAGTQDGSILAWKFNVATNCFEPAASL 264

Query: 1256 EGHTKSVLSLIVGAKKLFSGSADHTIRVWDAESLECLHVLNGHTGEVTTVLCWDHYLLSG 1435
             GHT  V+SL+VGA +L+SGS DHTI+VW  ESL+CL  L  HT  V +VLCW+ +LLS 
Sbjct: 265  SGHTLPVVSLVVGANRLYSGSMDHTIKVWSLESLQCLQTLTDHTSVVMSVLCWEQFLLSC 324

Query: 1436 SLDKKIKVWGATKSG 1480
            SLDK IKVW AT+SG
Sbjct: 325  SLDKTIKVWAATESG 339


>ref|XP_002264800.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
            vinifera] gi|296083041|emb|CBI22445.3| unnamed protein
            product [Vitis vinifera]
          Length = 469

 Score =  286 bits (733), Expect = 7e-75
 Identities = 153/385 (39%), Positives = 224/385 (58%), Gaps = 7/385 (1%)
 Frame = +2

Query: 347  DVSVFKRLGRGNQENIARNHPVVCKYWLEGRCTRNPCRFLHPEPAKHSPKQ-----SKYA 511
            D+   + +G  N+      + +VC YWL GRC RNPCRFLH E  +++  Q      K  
Sbjct: 2    DIKPSRLIGDKNERERRHVNNMVCSYWLRGRCNRNPCRFLHQELPQNTHYQISNQFGKNC 61

Query: 512  W-KNPNS-VKSENSPPIEKAQQNVLKNKVDHGQNQSVPKTKQKLLTSEVNVGQSKSIQKV 685
            W +NP+S  KS +S             K     NQS    +++ L S+   G+  S    
Sbjct: 62   WQRNPDSDSKSASSLTSLDRSSGSTTPKCSSASNQSHRNNRERSLYSDQK-GEWDSTNLR 120

Query: 686  DCGQNQSIPKIQQKLLTSEVNVGESKCIQKEHKLCDDWVTENCTKDDKCKKLHSWLCGNG 865
                +          +T +V +GE        ++C  W+  NC + DKC+ LHSW  G+G
Sbjct: 121  CSSSSTRAGSSSGNGITQKV-IGE--------RVCKYWLHGNCVEADKCQYLHSWFKGHG 171

Query: 866  LSMVALLEGHTKAVTGIVLPSGSDKLYCGSKDKSLRVWDCNSGQCGVVVGFDDECGTLVN 1045
            +  +A L GH  A++GIVLPSGS KLY  S+D  +RVWDC++GQC  VV    E G+L++
Sbjct: 172  VFKLAELNGHIMAISGIVLPSGSKKLYTASRDGYIRVWDCHTGQCDGVVNLGGEIGSLIS 231

Query: 1046 EGPWILVGLRDMIKAWNLNTQHELLVRGSGGQVNAITMFEDILFAGMEDGTILSWKSTSE 1225
             GPW+  G++D++KAWN+ +   L + G  GQ+ A+ +  DILFAG ++GTI +WK+  E
Sbjct: 232  AGPWVFAGIKDVVKAWNIESCANLSLDGPVGQIYAMVVNNDILFAGAQNGTIHAWKANKE 291

Query: 1226 ISFSEVPTSLEGHTKSVLSLIVGAKKLFSGSADHTIRVWDAESLECLHVLNGHTGEVTTV 1405
             +  E  T+LEGH  +V+SL VG  +L+SGS D+TIRVWD ++L+C+H L  H   V ++
Sbjct: 292  TNAFEPATTLEGHNGAVVSLTVGGGRLYSGSMDNTIRVWDLDTLQCIHTLKEHASVVMSL 351

Query: 1406 LCWDHYLLSGSLDKKIKVWGATKSG 1480
            +CW  YL+S SLD+ IKVW A ++G
Sbjct: 352  VCWGPYLISCSLDQTIKVWFAIEAG 376


>ref|XP_002272321.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
            vinifera]
          Length = 469

 Score =  286 bits (733), Expect = 7e-75
 Identities = 151/381 (39%), Positives = 221/381 (58%), Gaps = 3/381 (0%)
 Frame = +2

Query: 347  DVSVFKRLGRGNQENIARNHPVVCKYWLEGRCTRNPCRFLHPEPAKHSPKQSKYAWKNPN 526
            D+   + +G  N+    R + +VC YWL GRC RNPCRFLH E     P+ + Y   N  
Sbjct: 2    DIKPSRLVGDKNERGRRRVNNMVCSYWLRGRCNRNPCRFLHQE----LPQNTHYQISNQF 57

Query: 527  SVKSENSPPIEKAQQNVLKNKVDHGQNQSVPKTKQKLLTSEVN--VGQSKSIQKVDCGQ- 697
                    P   +++      +D     + PK       S  N   G   S QK +    
Sbjct: 58   HKNCWQRNPDSDSKRASSLTSLDRSSGSTTPKRSSASNQSHRNNREGTLYSDQKGEWDST 117

Query: 698  NQSIPKIQQKLLTSEVNVGESKCIQKEHKLCDDWVTENCTKDDKCKKLHSWLCGNGLSMV 877
            N        +  +S  N    K I +  ++C  W+  NC + DKC+ LHSW  G+G+  +
Sbjct: 118  NLRCSSSPTRAGSSSGNGITQKVIGE--RVCKYWLHGNCVEADKCQYLHSWFKGHGVFKL 175

Query: 878  ALLEGHTKAVTGIVLPSGSDKLYCGSKDKSLRVWDCNSGQCGVVVGFDDECGTLVNEGPW 1057
            A L GH KA++GIVLPSGS+KLY  S+D  +RVWDC++GQC  VV    E G+L++ GPW
Sbjct: 176  AELNGHIKAISGIVLPSGSEKLYTASRDGYIRVWDCHTGQCDGVVNLGGEIGSLISAGPW 235

Query: 1058 ILVGLRDMIKAWNLNTQHELLVRGSGGQVNAITMFEDILFAGMEDGTILSWKSTSEISFS 1237
            +  G++D++KAWN+ +  +L + G  GQ+ A+ +  D+LFAG ++GTI +WK+    +  
Sbjct: 236  LFAGIKDVVKAWNIESCTDLSLDGPVGQIYAMVVNNDMLFAGAQNGTIYAWKANKGNNAF 295

Query: 1238 EVPTSLEGHTKSVLSLIVGAKKLFSGSADHTIRVWDAESLECLHVLNGHTGEVTTVLCWD 1417
            E  T+LEGH  +V+SL VG  +L+SGS D+TIRVWD ++L+C+H L  H   V +++CW 
Sbjct: 296  EPATTLEGHNGAVVSLTVGDGRLYSGSMDNTIRVWDLDTLQCIHTLKEHASVVMSLVCWG 355

Query: 1418 HYLLSGSLDKKIKVWGATKSG 1480
             YL+S SLD+ IKVW AT++G
Sbjct: 356  PYLISCSLDQTIKVWFATEAG 376


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