BLASTX nr result

ID: Atractylodes22_contig00016860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016860
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]              626   e-177
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   602   e-170
ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|2...   597   e-168
ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-...   590   e-166
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   580   e-163

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  626 bits (1614), Expect = e-177
 Identities = 306/415 (73%), Positives = 342/415 (82%), Gaps = 1/415 (0%)
 Frame = +2

Query: 2    SINSLQVDLTEGRYLLSGASDASLAVYDIQRATDYEGGGLIAKHKPILLVDKQHQNGHKY 181
            ++NSLQVDLTEGRYLLSGASDAS AVYDIQRAT+YEGG L+AKHK I +VDKQH++GHKY
Sbjct: 45   AVNSLQVDLTEGRYLLSGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKY 104

Query: 182  AISTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSSLATSHMLIA 361
            AIS+AIWYPIDTGLF+TGSYDH+INVWDTNTTQVV++FKMPGK+YRTAMSSLAT+HMLIA
Sbjct: 105  AISSAIWYPIDTGLFITGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIA 164

Query: 362  AATEDVQVRLCDMASGAFSHTLSGHRDGVMAVEWSTSSEWVLMTGGCDGAIRLWDIRRAG 541
            A TEDVQVRLCD+ASGAF+HTLSGHRDGVM VEWSTSSEWVL+TGGCDGAIR WDIRRAG
Sbjct: 165  AGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG 224

Query: 542  CFSVLDQSHSQLGRRPPLLE-RXXXXXXXXXXXXXXXXXXXXARAPQRKVTXXXXXXXXX 718
            CF VLDQS SQLGRRPPLLE                      +RAPQRK           
Sbjct: 225  CFLVLDQSQSQLGRRPPLLECSTANKAPMSKSFPASQSVNVRSRAPQRKFAYGNGSKQSA 284

Query: 719  XXRILRHAKGSAKQRLHPGLLSSQDRATAHYGAVMGLKATEDGMYLLSAGSDSRLRLWDI 898
              R    AKG  +QRLHPG+LSSQDRAT+HYGAV GLK T+DGMYLLSAGSDSRLRLWDI
Sbjct: 285  TGRTSSQAKGLVRQRLHPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDI 344

Query: 899  QSSCNTLVHFEIVRLQSSKAIQLAVTQDSALVFVPCMTSVKAFDVWTGKTSMTLQGHYEH 1078
             S CNTLV+FE VRLQ+SKA+QLA+T DSALVFVPCMT+VKAFDVW+GKT+MT +GHYE+
Sbjct: 345  MSGCNTLVNFETVRLQTSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEY 404

Query: 1079 VNCCWYGTHDQELYTGGNDRQILIWSPPKLISEDMDEWDRKRGQAPAVDQDNWSD 1243
            VNCCW    DQELYTGGNDRQIL+WSP +L  ++MD   R+     A DQDNWSD
Sbjct: 405  VNCCWLSLQDQELYTGGNDRQILVWSPSRLNFDEMDHGSREE-PIHAQDQDNWSD 458


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  602 bits (1553), Expect = e-170
 Identities = 294/414 (71%), Positives = 334/414 (80%)
 Frame = +2

Query: 2    SINSLQVDLTEGRYLLSGASDASLAVYDIQRATDYEGGGLIAKHKPILLVDKQHQNGHKY 181
            +INSLQVDLTEGRYL+SGASDAS AV+D+QRATD+E  G+IAKHK + +VDKQH+  HKY
Sbjct: 77   AINSLQVDLTEGRYLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKY 136

Query: 182  AISTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSSLATSHMLIA 361
            A+S+A WYP+DTGLFVTGSYDH+I VWDTNTTQVV++FK+PGKVYRTAMS LATSHMLIA
Sbjct: 137  AVSSATWYPVDTGLFVTGSYDHYIKVWDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIA 196

Query: 362  AATEDVQVRLCDMASGAFSHTLSGHRDGVMAVEWSTSSEWVLMTGGCDGAIRLWDIRRAG 541
            A TEDVQVRLCD+ASGAF+HTLSGHRDGVM VEWSTSSEWVL+TGGCDGAIR WDIRRAG
Sbjct: 197  AGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG 256

Query: 542  CFSVLDQSHSQLGRRPPLLERXXXXXXXXXXXXXXXXXXXXARAPQRKVTXXXXXXXXXX 721
            CF VLDQS SQLGRRPP+L R                    +RAP +K            
Sbjct: 257  CFRVLDQSQSQLGRRPPVLPRSVANKVSSRSLLAGQHLSSKSRAPLKKSATGNGKKQSPL 316

Query: 722  XRILRHAKGSAKQRLHPGLLSSQDRATAHYGAVMGLKATEDGMYLLSAGSDSRLRLWDIQ 901
             R     KG  +QRLHPG+LS QDRATAHYGAV GLK TEDGMYLLSAGSDSR+RLWD++
Sbjct: 317  GR--TPVKGPVRQRLHPGMLSIQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDLE 374

Query: 902  SSCNTLVHFEIVRLQSSKAIQLAVTQDSALVFVPCMTSVKAFDVWTGKTSMTLQGHYEHV 1081
            S CNTLV+FE VRLQ+SKAIQLA TQDS+LVFVPCMT+VKAFD+W+G TSMT +GHYE+V
Sbjct: 375  SGCNTLVNFETVRLQTSKAIQLATTQDSSLVFVPCMTAVKAFDLWSGMTSMTFRGHYEYV 434

Query: 1082 NCCWYGTHDQELYTGGNDRQILIWSPPKLISEDMDEWDRKRGQAPAVDQDNWSD 1243
            NCCWY + DQE+YTGGNDRQIL+W PP+LI  DM+         PA DQDNWSD
Sbjct: 435  NCCWYSSQDQEIYTGGNDRQILVWCPPRLI--DME-------TGPAEDQDNWSD 479


>ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|222860803|gb|EEE98345.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  597 bits (1538), Expect = e-168
 Identities = 298/417 (71%), Positives = 334/417 (80%), Gaps = 3/417 (0%)
 Frame = +2

Query: 2    SINSLQVDLTEGRYLLSGASDASLAVYDIQRATDYEGGG---LIAKHKPILLVDKQHQNG 172
            SINSLQVDLTEGRYLLSGASDAS +V+DIQ ATD+EGGG   LIAKHK ++ +DKQHQNG
Sbjct: 45   SINSLQVDLTEGRYLLSGASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNG 104

Query: 173  HKYAISTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSSLATSHM 352
            HK+AIS+AIWYPIDTGLFVTGSYDH+I VWDTN+TQ+V++FK+PGKVYRTAMS LATSHM
Sbjct: 105  HKFAISSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHM 164

Query: 353  LIAAATEDVQVRLCDMASGAFSHTLSGHRDGVMAVEWSTSSEWVLMTGGCDGAIRLWDIR 532
            LIAA TEDVQVRLCD+ASGAF+HTLSGHRDGVM VEWSTSSEWVL+TGGCDGAIR WDIR
Sbjct: 165  LIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIR 224

Query: 533  RAGCFSVLDQSHSQLGRRPPLLERXXXXXXXXXXXXXXXXXXXXARAPQRKVTXXXXXXX 712
            RAGCF VLDQS SQLGRRPP+L R                     R PQ+K         
Sbjct: 225  RAGCFLVLDQSQSQLGRRPPVLAR--SAVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKH 282

Query: 713  XXXXRILRHAKGSAKQRLHPGLLSSQDRATAHYGAVMGLKATEDGMYLLSAGSDSRLRLW 892
                ++   AKG  KQRLHPG+LSSQDRATAHYGAV GLK TEDGMYLLSAGSDSR+RLW
Sbjct: 283  SPLGQV--PAKGYLKQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLW 340

Query: 893  DIQSSCNTLVHFEIVRLQSSKAIQLAVTQDSALVFVPCMTSVKAFDVWTGKTSMTLQGHY 1072
            D++S  NTLV+FE  RLQ+SK IQLA  QDS LVFVPCMTSVKAFDVW+GKT +T +GHY
Sbjct: 341  DVESGRNTLVNFETARLQTSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHY 400

Query: 1073 EHVNCCWYGTHDQELYTGGNDRQILIWSPPKLISEDMDEWDRKRGQAPAVDQDNWSD 1243
            EHVNCCW+ + DQELYTGGNDRQIL+WSP +LI  +          +PA DQDNWSD
Sbjct: 401  EHVNCCWFSSQDQELYTGGNDRQILVWSPARLIPNE--------DASPAEDQDNWSD 449


>ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-8-like [Glycine max]
          Length = 460

 Score =  590 bits (1522), Expect = e-166
 Identities = 294/417 (70%), Positives = 331/417 (79%), Gaps = 4/417 (0%)
 Frame = +2

Query: 2    SINSLQVDLTEGRYLLSGASDASLAVYDIQRATDYE----GGGLIAKHKPILLVDKQHQN 169
            +INSLQVD TEGRYLLS ASDAS+AVYD+QR T YE    GGG I+KH  I +VDKQHQ 
Sbjct: 53   AINSLQVDSTEGRYLLSAASDASVAVYDVQRPTVYEAGGGGGGGISKHSSIFVVDKQHQQ 112

Query: 170  GHKYAISTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSSLATSH 349
            GHKYA+STAIWYPIDTGLFVTGSYDHHINVWDTNTTQVV++FKMPGKV+R AMS+L+TSH
Sbjct: 113  GHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSH 172

Query: 350  MLIAAATEDVQVRLCDMASGAFSHTLSGHRDGVMAVEWSTSSEWVLMTGGCDGAIRLWDI 529
            MLIAAATEDVQVRLCD+ASGAF+HTLSGHRDGVM VEWS SSEWVL+TGGCDGAIR WDI
Sbjct: 173  MLIAAATEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDI 232

Query: 530  RRAGCFSVLDQSHSQLGRRPPLLERXXXXXXXXXXXXXXXXXXXXARAPQRKVTXXXXXX 709
            RRAGCF VLDQS +QLGRRPP+L+R                     RA Q+K        
Sbjct: 233  RRAGCFQVLDQSQTQLGRRPPILKRSMITKVKSQSLYHSQDSSTKLRAAQKKHANGSGSR 292

Query: 710  XXXXXRILRHAKGSAKQRLHPGLLSSQDRATAHYGAVMGLKATEDGMYLLSAGSDSRLRL 889
                 R+   +KG  KQRLHPG+LS+QDRATAHYGAV GLKATEDGMYLLSAGSDSRLRL
Sbjct: 293  QQPIGRV--PSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRL 350

Query: 890  WDIQSSCNTLVHFEIVRLQSSKAIQLAVTQDSALVFVPCMTSVKAFDVWTGKTSMTLQGH 1069
            WD++SSCNTLV+FE VRLQ +K +QLA TQDSALVFVPCM SVKAFD+W+G T   L+GH
Sbjct: 351  WDVESSCNTLVNFETVRLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTILRGH 410

Query: 1070 YEHVNCCWYGTHDQELYTGGNDRQILIWSPPKLISEDMDEWDRKRGQAPAVDQDNWS 1240
            YE VN CW+  HDQELYTGGNDRQIL+WSP + I+++M        +  A DQDNWS
Sbjct: 411  YECVNSCWFNQHDQELYTGGNDRQILVWSPARSIADEM--------EGTAEDQDNWS 459


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  580 bits (1496), Expect = e-163
 Identities = 287/414 (69%), Positives = 329/414 (79%)
 Frame = +2

Query: 2    SINSLQVDLTEGRYLLSGASDASLAVYDIQRATDYEGGGLIAKHKPILLVDKQHQNGHKY 181
            S+NSLQVDLTEGRYLLSGASDAS AV+DIQRAT  EG  LIAKH+ I  VDKQH++GHKY
Sbjct: 45   SVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKY 102

Query: 182  AISTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSSLATSHMLIA 361
            AIS+AIWYP+DTGLFVTGS+DHHINVWDTNTTQVV++FK+PGKVYRTAMSSLATSHMLIA
Sbjct: 103  AISSAIWYPVDTGLFVTGSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIA 162

Query: 362  AATEDVQVRLCDMASGAFSHTLSGHRDGVMAVEWSTSSEWVLMTGGCDGAIRLWDIRRAG 541
            A TEDVQVRLCD++SGAFSHTLSGHRDGVM+VEWS SSEWVL+TGGCDGAIR WDIRRAG
Sbjct: 163  AGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAG 222

Query: 542  CFSVLDQSHSQLGRRPPLLERXXXXXXXXXXXXXXXXXXXXARAPQRKVTXXXXXXXXXX 721
            CF VLDQS SQLGRRPP+                       +R P +K+T          
Sbjct: 223  CFRVLDQSQSQLGRRPPISGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSST 282

Query: 722  XRILRHAKGSAKQRLHPGLLSSQDRATAHYGAVMGLKATEDGMYLLSAGSDSRLRLWDIQ 901
             ++   AKGS +QRLHPGLLS QDRA +HYGAV GLK T DGMYLLSAGSDSRL+LWD++
Sbjct: 283  GKL--PAKGSTRQRLHPGLLSGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVE 340

Query: 902  SSCNTLVHFEIVRLQSSKAIQLAVTQDSALVFVPCMTSVKAFDVWTGKTSMTLQGHYEHV 1081
            S CNTLV+FE +RLQ++K +QLA +QDS+LVF PCM +VKAFD+WTGKTS+T  GHYE V
Sbjct: 341  SGCNTLVNFETIRLQTNKPLQLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGV 400

Query: 1082 NCCWYGTHDQELYTGGNDRQILIWSPPKLISEDMDEWDRKRGQAPAVDQDNWSD 1243
            NCCWY   DQELYTGGNDRQIL+WSP +  +E   +W+         D+DNWSD
Sbjct: 401  NCCWYNFPDQELYTGGNDRQILVWSPSQNSTE--LDWE------STADKDNWSD 446


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