BLASTX nr result

ID: Atractylodes22_contig00016830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016830
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...    96   4e-18
ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    81   1e-13
emb|CAN69868.1| hypothetical protein VITISV_020240 [Vitis vinifera]    81   1e-13
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...    79   4e-13

>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           48-like [Cucumis sativus]
          Length = 432

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
 Frame = +2

Query: 281 MDFDGG-KRVFDRLGPPQQQSDNRNQKVCYHWRAGNCNRFPCPFLHRELSAP----ANG- 442
           MD DGG KRVF RLG P    D+RNQKVC+HWRAG C+R+PCP+LHREL+ P    +NG 
Sbjct: 1   MDVDGGGKRVFQRLGAPS--GDSRNQKVCFHWRAGKCSRYPCPYLHRELNGPPHAASNGA 58

Query: 443 -TASSKRPYGFATDEQRSTTARR 508
             A+SKR +GFA+D+   +  RR
Sbjct: 59  ANAASKRGHGFASDDSSVSVPRR 81


>ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/101 (46%), Positives = 57/101 (56%), Gaps = 24/101 (23%)
 Frame = +2

Query: 281 MDFDGG------KRVFDRLGPPQQQSDN---------RNQKVCYHWRAGNCNRFPCPFLH 415
           +D++GG      KRVF RLG  +  +D          +NQKVCYHWRAG CNRFPCPFLH
Sbjct: 3   LDYNGGNTTNTNKRVFHRLGGGKSVNDTSNQHNHQHQQNQKVCYHWRAGKCNRFPCPFLH 62

Query: 416 RELSAP---------ANGTASSKRPYGFATDEQRSTTARRG 511
           REL AP           G   +KR  GFA ++  S + RRG
Sbjct: 63  RELPAPPPHASVNGGGGGGGGAKR--GFAGNDSSSFSGRRG 101


>ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 48-like [Vitis vinifera]
          Length = 249

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
 Frame = +2

Query: 281 MDFDGGKRVFDRLGPPQQQSDNRNQKVCYHWRAGNCNRFPCPFLHRELSAP--------- 433
           +D  G KRVF RLG        + QKVCYHWRAG CN+FPCP+LHREL AP         
Sbjct: 3   VDEHGNKRVFQRLGA--SNDSGKQQKVCYHWRAGRCNKFPCPYLHRELPAPPPEQYQPFI 60

Query: 434 ANGTASSKRPYGFATDEQRSTTARR 508
           +NG +SSKRP     D++  + ARR
Sbjct: 61  SNG-SSSKRPNQGVHDDRSFSGARR 84


>emb|CAN69868.1| hypothetical protein VITISV_020240 [Vitis vinifera]
          Length = 210

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
 Frame = +2

Query: 281 MDFDGGKRVFDRLGPPQQQSDNRNQKVCYHWRAGNCNRFPCPFLHRELSAP--------- 433
           +D  G KRVF RLG        + QKVCYHWRAG CN+FPCP+LHREL AP         
Sbjct: 3   VDEHGNKRVFQRLGA--SNDSGKQQKVCYHWRAGRCNKFPCPYLHRELPAPPPEQYQPFI 60

Query: 434 ANGTASSKRPYGFATDEQRSTTARR 508
           +NG +SSKRP     D++  + ARR
Sbjct: 61  SNG-SSSKRPNQGVHDDRSFSGARR 84


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
           vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
 Frame = +2

Query: 281 MDFDGGKRVFDRLGPPQQQSDNRNQKVCYHWRAGNCNRFPCPFLHRELSAP--------- 433
           +D  G KRVF RLG        +  KVCYHWRAG CN+FPCP+LHREL AP         
Sbjct: 3   VDEHGNKRVFQRLGA--SNDSGKQHKVCYHWRAGRCNKFPCPYLHRELPAPPPQQHQPFI 60

Query: 434 ANGTASSKRPYGFATDEQRSTTARR 508
           +NG +SSKRP     D++  + ARR
Sbjct: 61  SNG-SSSKRPNQGVHDDRSFSGARR 84


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