BLASTX nr result

ID: Atractylodes22_contig00016815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016815
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36765.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   100   1e-19
emb|CAN83792.1| hypothetical protein VITISV_021048 [Vitis vinifera]   100   1e-19
ref|XP_002275434.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...    98   8e-19
ref|XP_002306771.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/104 (50%), Positives = 67/104 (64%)
 Frame = +3

Query: 39  NSNSTLIIFCNSA*MSGDSAAGTTISGHRSTVRVVVVGDHDTGKSSLIATVASDNFPETV 218
           NS + L  F     +   ++AG T SG+R+ VR+VV GD  TGKSSLI T A++NFP  V
Sbjct: 23  NSQNNLPQFSIQQGLMAKASAGATNSGNRTGVRIVVAGDRGTGKSSLIVTAAAENFPANV 82

Query: 219 SPVLPPTRLPADYFPDGIPVTIIDTPSSXXXXXXXXXXXXRADA 350
           +PVLPPTRLP D++PD +P+TIIDT SS            RADA
Sbjct: 83  APVLPPTRLPDDFYPDRVPITIIDTSSSLENRSALADELRRADA 126


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = +3

Query: 93  SAAGTTISGHRSTVRVVVVGDHDTGKSSLIATVASDNFPETVSPVLPPTRLPADYFPDGI 272
           ++AG T SG+R+ VR+VV GD  TGKSSLI T A++NFP  V+PVLPPTRLP D++PD +
Sbjct: 4   ASAGATNSGNRTGVRIVVAGDRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRV 63

Query: 273 PVTIIDTPSSXXXXXXXXXXXXRADA 350
           P+TIIDT SS            RADA
Sbjct: 64  PITIIDTSSSLENRSALADELRRADA 89


>emb|CAN83792.1| hypothetical protein VITISV_021048 [Vitis vinifera]
          Length = 180

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = +3

Query: 93  SAAGTTISGHRSTVRVVVVGDHDTGKSSLIATVASDNFPETVSPVLPPTRLPADYFPDGI 272
           ++AG T SG+R+ VR+VV GD  TGKSSLI T A++NFP  V+PVLPPTRLP D++PD +
Sbjct: 4   ASAGATNSGNRTGVRIVVAGDRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRV 63

Query: 273 PVTIIDTPSSXXXXXXXXXXXXRADA 350
           P+TIIDT SS            RADA
Sbjct: 64  PITIIDTSSSLENRSALADELRRADA 89


>ref|XP_002275434.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
           gi|296086704|emb|CBI32339.3| unnamed protein product
           [Vitis vinifera]
          Length = 639

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/80 (63%), Positives = 59/80 (73%)
 Frame = +3

Query: 111 ISGHRSTVRVVVVGDHDTGKSSLIATVASDNFPETVSPVLPPTRLPADYFPDGIPVTIID 290
           +SG R+ VRVVVVGD  TGKSSLI+T A++ FPETV PVLPPTRLPAD++PD +PVTIID
Sbjct: 4   VSG-RTGVRVVVVGDRGTGKSSLISTAATETFPETVQPVLPPTRLPADFYPDRVPVTIID 62

Query: 291 TPSSXXXXXXXXXXXXRADA 350
           T SS            RADA
Sbjct: 63  TSSSLEHRAKLAEELKRADA 82


>ref|XP_002306771.1| predicted protein [Populus trichocarpa] gi|222856220|gb|EEE93767.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/87 (56%), Positives = 62/87 (71%)
 Frame = +3

Query: 87  GDSAAGTTISGHRSTVRVVVVGDHDTGKSSLIATVASDNFPETVSPVLPPTRLPADYFPD 266
           G+SAA    +G ++ VR+VVVGD  TGKSSLIA  A+++FPE +SPVLPPTRLPAD+FPD
Sbjct: 4   GNSAA----AGGKTGVRIVVVGDRGTGKSSLIAAAATESFPENLSPVLPPTRLPADFFPD 59

Query: 267 GIPVTIIDTPSSXXXXXXXXXXXXRAD 347
            +P+TIIDT +S            RAD
Sbjct: 60  RVPITIIDTSASLESRGKLNEELKRAD 86


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