BLASTX nr result

ID: Atractylodes22_contig00016774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016774
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90610.1| chloroplast thylakoid lumenal 17.4 kDa protein [S...   228   5e-58
ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei...   221   5e-56
emb|CBI23038.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-55
ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloropl...   215   3e-54

>gb|AFW90610.1| chloroplast thylakoid lumenal 17.4 kDa protein [Solanum tuberosum]
          Length = 228

 Score =  228 bits (580), Expect = 5e-58
 Identities = 117/167 (70%), Positives = 136/167 (81%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 MASLFLPLPHKFSSPGLSSTVKRTRLPLHSSIRLNCS-DNSVSTSKENSCQFKELRNVAC 324
           MAS+ +PL +K  S   S   + ++L  HS I++ CS     S S+E+S QFK+LRNVAC
Sbjct: 1   MASISIPLAYKSHSLRRSPIYRPSQL--HSPIQIKCSASKDCSNSEESSTQFKQLRNVAC 58

Query: 323 GILAAWALTTTSPVIAANQRLPPLSTDPDRCARAFVGNTIGQANGVYDKAIDLRFCDYTN 144
           G LA WAL++ SPVIAA QRLPPLSTDP+RC RAFVG+TIGQANGVYDK +DLRFCDYTN
Sbjct: 59  GFLAVWALSSVSPVIAAGQRLPPLSTDPNRCERAFVGSTIGQANGVYDKPLDLRFCDYTN 118

Query: 143 DKTNLKGKSLAAALMSGAKFDGADMTEVVMSKAYAVGASFKGTDFTN 3
           +KTNLKGKSLAAALMS AKFDGADMTEV+MSKAYAVGASFK  DF+N
Sbjct: 119 EKTNLKGKSLAAALMSDAKFDGADMTEVIMSKAYAVGASFKAMDFSN 165


>ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis
           vinifera]
          Length = 244

 Score =  221 bits (563), Expect = 5e-56
 Identities = 122/173 (70%), Positives = 137/173 (79%), Gaps = 4/173 (2%)
 Frame = -1

Query: 509 RLKMASLFLPLPHKFSSPGLSSTVKRTRLP---LHSSIRLNCSDNSVSTS-KENSCQFKE 342
           R KMA+L +PL  + SSP      KR R     LHS  R++CS +  S   K +S QFKE
Sbjct: 10  REKMATLSIPLSLQHSSP------KRHRFSVPELHSPFRISCSASWDSPELKASSSQFKE 63

Query: 341 LRNVACGILAAWALTTTSPVIAANQRLPPLSTDPDRCARAFVGNTIGQANGVYDKAIDLR 162
           L+NVA GILA  A+T  SPVIAA+QRLPPLST+P+RC RAFVGNTIGQANGVYDK IDLR
Sbjct: 64  LKNVAFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLR 123

Query: 161 FCDYTNDKTNLKGKSLAAALMSGAKFDGADMTEVVMSKAYAVGASFKGTDFTN 3
           FCDYTN+K+NLKGKSLAAALMS AKFDGADM+EVVMSKAYAVGASFKG DFTN
Sbjct: 124 FCDYTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTN 176


>emb|CBI23038.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  218 bits (556), Expect = 3e-55
 Identities = 120/170 (70%), Positives = 135/170 (79%), Gaps = 4/170 (2%)
 Frame = -1

Query: 500 MASLFLPLPHKFSSPGLSSTVKRTRLP---LHSSIRLNCSDNSVSTS-KENSCQFKELRN 333
           MA+L +PL  + SSP      KR R     LHS  R++CS +  S   K +S QFKEL+N
Sbjct: 1   MATLSIPLSLQHSSP------KRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKN 54

Query: 332 VACGILAAWALTTTSPVIAANQRLPPLSTDPDRCARAFVGNTIGQANGVYDKAIDLRFCD 153
           VA GILA  A+T  SPVIAA+QRLPPLST+P+RC RAFVGNTIGQANGVYDK IDLRFCD
Sbjct: 55  VAFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCD 114

Query: 152 YTNDKTNLKGKSLAAALMSGAKFDGADMTEVVMSKAYAVGASFKGTDFTN 3
           YTN+K+NLKGKSLAAALMS AKFDGADM+EVVMSKAYAVGASFKG DFTN
Sbjct: 115 YTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTN 164


>ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|222859113|gb|EEE96660.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  218 bits (554), Expect = 5e-55
 Identities = 118/169 (69%), Positives = 136/169 (80%), Gaps = 4/169 (2%)
 Frame = -1

Query: 497 ASLFLPLP-HKFSSPGLSSTVKRTRLP-LHSSIRLNCSDN-SVSTSKENSCQFK-ELRNV 330
           A+  LPL  +KF     SS  +R  +P LHS +++ CS +   S S+E+  QFK E+  V
Sbjct: 4   ATFSLPLSQNKFPLYHFSSARRRFPIPDLHSPLKICCSGSRDGSQSRESLFQFKKEINYV 63

Query: 329 ACGILAAWALTTTSPVIAANQRLPPLSTDPDRCARAFVGNTIGQANGVYDKAIDLRFCDY 150
           ACGILAAWA+T  SPVIAA QRLPPLST+P+RC +AFVGNTIGQANGVYDK IDLRFCDY
Sbjct: 64  ACGILAAWAVTAASPVIAAGQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 123

Query: 149 TNDKTNLKGKSLAAALMSGAKFDGADMTEVVMSKAYAVGASFKGTDFTN 3
           TNDK+NLKGKSLAAALMS AKFDGADMTEVVMSKAYAVGASF+G DF+N
Sbjct: 124 TNDKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFRGVDFSN 172


>ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534416|gb|EEF36120.1| Thylakoid
           lumenal 17.4 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 228

 Score =  215 bits (547), Expect = 3e-54
 Identities = 115/167 (68%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 MASLFLPLPHKFSSPGLSSTVKRTRLP-LHSSIRLNCSDNSVSTSKENSCQFKELRNVAC 324
           MA++  PL    S   LSS   R  +P LH  I++ CS    S     S  FKEL++VAC
Sbjct: 1   MATISFPL----SVRSLSSERSRFPVPQLHPPIKIICSG---SADGSKSKPFKELQSVAC 53

Query: 323 GILAAWALTTTSPVIAANQRLPPLSTDPDRCARAFVGNTIGQANGVYDKAIDLRFCDYTN 144
           G+LAAWA+T+ SPVIAA+QRLPPLST+P+RC +AFVGNTIGQANGVYDK IDLRFCDYTN
Sbjct: 54  GLLAAWAVTSASPVIAASQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDYTN 113

Query: 143 DKTNLKGKSLAAALMSGAKFDGADMTEVVMSKAYAVGASFKGTDFTN 3
           +K+NLKGKSLAAALMS AKFDGADM+EVVMSKAYAVGASFKG DF+N
Sbjct: 114 EKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSN 160


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